Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RNF144AP50876 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RNF144AP50876 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.92□□□□□ -0.02
RNF144AP50876 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 AC018892.3-201ENST00000623986 2499 ntBASIC14.91□□□□□ -0.02
RNF144AP50876 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNF144AP50876 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RNF144AP50876 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RNF144AP50876 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.91□□□□□ -0.02
RNF144AP50876 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
RNF144AP50876 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 FAM58DP-201ENST00000428076 619 ntBASIC14.91□□□□□ -0.02
RNF144AP50876 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF144AP50876 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 FAM86C2P-203ENST00000528684 1004 ntBASIC14.91□□□□□ -0.02
RNF144AP50876 LINC01225-203ENST00000563550 1244 ntBASIC14.91□□□□□ -0.02
RNF144AP50876 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF144AP50876 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF144AP50876 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.91□□□□□ -0.02
RNF144AP50876 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF144AP50876 AL596442.2-201ENST00000610240 980 ntBASIC14.91□□□□□ -0.02
RNF144AP50876 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF144AP50876 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RNF144AP50876 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 CICP13-201ENST00000422015 2789 ntBASIC14.91□□□□□ -0.02
RNF144AP50876 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RNF144AP50876 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF144AP50876 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RNF144AP50876 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RNF144AP50876 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 AC022532.1-201ENST00000624563 1728 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RNF144AP50876 AC004461.1-201ENST00000412461 403 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 UPF3AP3-201ENST00000420996 769 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 RPS8P6-201ENST00000426177 609 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 MKNK2P1-201ENST00000437526 628 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 AC093520.2-201ENST00000561830 333 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.9□□□□□ -0.02
RNF144AP50876 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 AC105339.1-204ENST00000636249 355 ntBASIC14.9□□□□□ -0.02
RNF144AP50876 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF144AP50876 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RNF144AP50876 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF144AP50876 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
RNF144AP50876 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF144AP50876 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms