Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
PSEN1P49768 KC6-207ENST00000600644 2311 ntTSL 3 BASIC17.12■□□□□ 0.33
PSEN1P49768 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PSEN1P49768 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSEN1P49768 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 AC013410.2-201ENST00000422627 201 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 AL353705.2-201ENST00000428243 662 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 RNA5SP410-201ENST00000516285 106 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC17.11■□□□□ 0.33
PSEN1P49768 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.11■□□□□ 0.33
PSEN1P49768 AC140878.1-201ENST00000565277 250 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 AL355385.1-201ENST00000606123 409 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 AC024933.1-201ENST00000608472 348 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 AC007967.4-201ENST00000614700 386 ntBASIC17.11■□□□□ 0.33
PSEN1P49768 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.11■□□□□ 0.33
PSEN1P49768 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PSEN1P49768 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.11■□□□□ 0.33
PSEN1P49768 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PSEN1P49768 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSEN1P49768 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PSEN1P49768 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 AC005622.1-201ENST00000636801 1703 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.1■□□□□ 0.33
PSEN1P49768 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 AC107890.1-201ENST00000422478 521 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.1■□□□□ 0.33
PSEN1P49768 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.1■□□□□ 0.33
PSEN1P49768 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 AL365330.1-201ENST00000607459 531 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 AC093512.1-201ENST00000617969 520 ntBASIC17.1■□□□□ 0.33
PSEN1P49768 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.1■□□□□ 0.33
PSEN1P49768 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PSEN1P49768 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSEN1P49768 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms