Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SLC6A12P48065 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A12P48065 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A12P48065 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A12P48065 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AL589739.1-201ENST00000607720 493 ntBASIC15.36■□□□□ 0.05
SLC6A12P48065 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AC079781.4-201ENST00000641908 219 ntBASIC15.36■□□□□ 0.05
SLC6A12P48065 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
SLC6A12P48065 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A12P48065 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC6A12P48065 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC6A12P48065 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 CETN4P-206ENST00000642099 2168 ntBASIC15.35■□□□□ 0.05
SLC6A12P48065 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A12P48065 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A12P48065 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SLC6A12P48065 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SLC6A12P48065 AC015911.4-201ENST00000588022 1070 ntBASIC15.35■□□□□ 0.05
SLC6A12P48065 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A12P48065 AP001160.2-201ENST00000596071 487 ntBASIC15.35■□□□□ 0.05
SLC6A12P48065 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC6A12P48065 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SLC6A12P48065 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC6A12P48065 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC6A12P48065 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC6A12P48065 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.35■□□□□ 0.05
SLC6A12P48065 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms