Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PBX3P40426 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PBX3P40426 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PBX3P40426 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PBX3P40426 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PBX3P40426 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PBX3P40426 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PBX3P40426 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PBX3P40426 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.96■□□□□ 0.3
PBX3P40426 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PBX3P40426 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 TOMM22P5-201ENST00000416399 439 ntBASIC16.95■□□□□ 0.3
PBX3P40426 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.95■□□□□ 0.3
PBX3P40426 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.95■□□□□ 0.3
PBX3P40426 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
PBX3P40426 PHKG1P2-201ENST00000457537 863 ntBASIC16.95■□□□□ 0.3
PBX3P40426 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.95■□□□□ 0.3
PBX3P40426 AP001889.1-201ENST00000525414 633 ntBASIC16.95■□□□□ 0.3
PBX3P40426 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 AL583810.1-201ENST00000553344 1045 ntBASIC16.95■□□□□ 0.3
PBX3P40426 HNRNPUP1-201ENST00000554987 333 ntBASIC16.95■□□□□ 0.3
PBX3P40426 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.95■□□□□ 0.3
PBX3P40426 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.95■□□□□ 0.3
PBX3P40426 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.95■□□□□ 0.3
PBX3P40426 AL022328.1-201ENST00000610050 478 ntBASIC16.95■□□□□ 0.3
PBX3P40426 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.95■□□□□ 0.3
PBX3P40426 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.95■□□□□ 0.3
PBX3P40426 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PBX3P40426 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PBX3P40426 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PBX3P40426 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
PBX3P40426 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.94■□□□□ 0.3
PBX3P40426 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.94■□□□□ 0.3
PBX3P40426 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.94■□□□□ 0.3
PBX3P40426 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 MIR1908-201ENST00000410394 80 ntBASIC16.94■□□□□ 0.3
PBX3P40426 SOCS2P1-201ENST00000417727 557 ntBASIC16.94■□□□□ 0.3
PBX3P40426 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.94■□□□□ 0.3
PBX3P40426 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.94■□□□□ 0.3
PBX3P40426 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.94■□□□□ 0.3
PBX3P40426 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.94■□□□□ 0.3
PBX3P40426 AC068587.3-201ENST00000526613 355 ntBASIC16.94■□□□□ 0.3
PBX3P40426 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PBX3P40426 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 AC120045.2-201ENST00000567334 178 ntBASIC16.94■□□□□ 0.3
PBX3P40426 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.94■□□□□ 0.3
PBX3P40426 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.94■□□□□ 0.3
PBX3P40426 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PBX3P40426 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PBX3P40426 AL607033.1-201ENST00000623900 1599 ntBASIC16.94■□□□□ 0.3
PBX3P40426 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PBX3P40426 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.93■□□□□ 0.3
PBX3P40426 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.93■□□□□ 0.3
PBX3P40426 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
PBX3P40426 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PBX3P40426 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.93■□□□□ 0.3
PBX3P40426 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PBX3P40426 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PBX3P40426 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms