Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.66□□□□□ -0.22
CDKN1AP38936 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDKN1AP38936 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.66□□□□□ -0.22
CDKN1AP38936 MEP1AP4-201ENST00000423244 1087 ntBASIC13.66□□□□□ -0.22
CDKN1AP38936 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.66□□□□□ -0.22
CDKN1AP38936 RN7SL837P-201ENST00000463010 287 ntBASIC13.66□□□□□ -0.22
CDKN1AP38936 ELK1P1-201ENST00000485699 580 ntBASIC13.66□□□□□ -0.22
CDKN1AP38936 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.66□□□□□ -0.22
CDKN1AP38936 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.66□□□□□ -0.22
CDKN1AP38936 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.66□□□□□ -0.22
CDKN1AP38936 CTBP2P3-201ENST00000585629 1255 ntBASIC13.66□□□□□ -0.22
CDKN1AP38936 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.66□□□□□ -0.22
CDKN1AP38936 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.66□□□□□ -0.22
CDKN1AP38936 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 CYP4F24P-201ENST00000586049 1580 ntBASIC13.66□□□□□ -0.22
CDKN1AP38936 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDKN1AP38936 GGT3P-204ENST00000453783 1664 ntBASIC13.66□□□□□ -0.22
CDKN1AP38936 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDKN1AP38936 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CDKN1AP38936 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDKN1AP38936 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDKN1AP38936 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.65□□□□□ -0.22
CDKN1AP38936 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 AC112492.5-201ENST00000421897 457 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 TTTY23B-201ENST00000442790 549 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 TIMM17BP1-201ENST00000545713 516 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.65□□□□□ -0.22
CDKN1AP38936 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.65□□□□□ -0.22
CDKN1AP38936 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CDKN1AP38936 MIR4321-201ENST00000592276 80 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.65□□□□□ -0.22
CDKN1AP38936 AL365330.1-201ENST00000607459 531 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 AC074044.1-201ENST00000609673 707 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDKN1AP38936 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDKN1AP38936 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDKN1AP38936 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.65□□□□□ -0.22
CDKN1AP38936 AC132872.4-202ENST00000622924 2756 ntBASIC13.65□□□□□ -0.22
CDKN1AP38936 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDKN1AP38936 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDKN1AP38936 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDKN1AP38936 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.64□□□□□ -0.23
CDKN1AP38936 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDKN1AP38936 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.64□□□□□ -0.23
CDKN1AP38936 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDKN1AP38936 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDKN1AP38936 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDKN1AP38936 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.64□□□□□ -0.23
CDKN1AP38936 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDKN1AP38936 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms