Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.18■□□□□ 0.02
RORAP35398 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.18■□□□□ 0.02
RORAP35398 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.18■□□□□ 0.02
RORAP35398 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.18■□□□□ 0.02
RORAP35398 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RORAP35398 AC025048.3-201ENST00000590609 569 ntBASIC15.18■□□□□ 0.02
RORAP35398 AC005702.4-201ENST00000618393 416 ntBASIC15.18■□□□□ 0.02
RORAP35398 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.18■□□□□ 0.02
RORAP35398 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RORAP35398 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RORAP35398 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.18■□□□□ 0.02
RORAP35398 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RORAP35398 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.18■□□□□ 0.02
RORAP35398 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
RORAP35398 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.18■□□□□ 0.02
RORAP35398 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RORAP35398 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RORAP35398 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.18■□□□□ 0.02
RORAP35398 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RORAP35398 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 AC004987.2-201ENST00000395959 1148 ntBASIC15.17■□□□□ 0.02
RORAP35398 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RORAP35398 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 AC087499.6-201ENST00000411576 835 ntBASIC15.17■□□□□ 0.02
RORAP35398 EEF1DP4-201ENST00000446006 880 ntBASIC15.17■□□□□ 0.02
RORAP35398 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.17■□□□□ 0.02
RORAP35398 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 AC092337.1-201ENST00000568699 1129 ntBASIC15.17■□□□□ 0.02
RORAP35398 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.17■□□□□ 0.02
RORAP35398 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 AC074044.1-201ENST00000609673 707 ntBASIC15.17■□□□□ 0.02
RORAP35398 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RORAP35398 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RORAP35398 CU639417.3-201ENST00000624240 1404 ntBASIC15.17■□□□□ 0.02
RORAP35398 AC006449.6-201ENST00000612330 2296 ntBASIC15.17■□□□□ 0.02
RORAP35398 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.17■□□□□ 0.02
RORAP35398 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.16■□□□□ 0.02
RORAP35398 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 SLC7A15P-201ENST00000424028 1363 ntBASIC15.16■□□□□ 0.02
RORAP35398 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RORAP35398 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.16■□□□□ 0.02
RORAP35398 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.16■□□□□ 0.02
RORAP35398 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms