Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 ZNF767P-206ENST00000513792 565 ntBASIC17.16■□□□□ 0.34
HOXC8P31273 AC010328.2-201ENST00000597698 1111 ntBASIC17.16■□□□□ 0.34
HOXC8P31273 AC145423.3-201ENST00000615987 467 ntBASIC17.16■□□□□ 0.34
HOXC8P31273 AC132938.4-201ENST00000623835 848 ntBASIC17.16■□□□□ 0.34
HOXC8P31273 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXC8P31273 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXC8P31273 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXC8P31273 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXC8P31273 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC8P31273 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC8P31273 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 NKILA-202ENST00000614771 2598 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HOXC8P31273 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 BRWD1P1-201ENST00000401091 371 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 ACTBP8-201ENST00000403258 1108 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 FAM197Y7-201ENST00000432892 766 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXC8P31273 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC8P31273 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXC8P31273 AC078819.1-201ENST00000547454 765 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 AC012085.1-201ENST00000548270 765 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC8P31273 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXC8P31273 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.15■□□□□ 0.34
HOXC8P31273 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXC8P31273 PRSS30P-206ENST00000641773 873 ntBASIC17.15■□□□□ 0.34
HOXC8P31273 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXC8P31273 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC8P31273 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC8P31273 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HOXC8P31273 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HOXC8P31273 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HOXC8P31273 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.14■□□□□ 0.33
HOXC8P31273 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC8P31273 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
HOXC8P31273 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HOXC8P31273 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC8P31273 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC8P31273 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC8P31273 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC8P31273 KRT18P25-201ENST00000508931 1278 ntBASIC17.14■□□□□ 0.33
HOXC8P31273 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.14■□□□□ 0.33
HOXC8P31273 RN7SL560P-201ENST00000577943 264 ntBASIC17.14■□□□□ 0.33
HOXC8P31273 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 BX539320.1-201ENST00000623759 877 ntBASIC17.14■□□□□ 0.33
HOXC8P31273 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HOXC8P31273 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 KRT8P35-201ENST00000483942 1338 ntBASIC17.14■□□□□ 0.33
HOXC8P31273 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
HOXC8P31273 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC8P31273 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC8P31273 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC8P31273 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC8P31273 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms