Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 AC020658.6-201ENST00000623564 1870 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 AC092127.1-201ENST00000567093 3455 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 MIR1233-2-201ENST00000408138 82 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 MIR1233-1-201ENST00000408722 82 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PTPN3P26045 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN3P26045 PHKG1P2-201ENST00000457537 863 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN3P26045 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN3P26045 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 RN7SL828P-201ENST00000607615 303 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 MIR6080-201ENST00000617359 66 ntBASIC16.27■□□□□ 0.2
PTPN3P26045 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN3P26045 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN3P26045 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN3P26045 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN3P26045 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN3P26045 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN3P26045 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN3P26045 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN3P26045 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN3P26045 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN3P26045 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN3P26045 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN3P26045 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN3P26045 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN3P26045 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN3P26045 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PTPN3P26045 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN3P26045 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PTPN3P26045 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN3P26045 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN3P26045 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN3P26045 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN3P26045 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 AL512356.2-201ENST00000546955 174 ntBASIC16.26■□□□□ 0.19
PTPN3P26045 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.26■□□□□ 0.19
PTPN3P26045 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN3P26045 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN3P26045 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN3P26045 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN3P26045 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN3P26045 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN3P26045 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN3P26045 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms