Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CYP3A4P08684 AL121723.1-201ENST00000445194 1519 ntBASIC17.82■□□□□ 0.44
CYP3A4P08684 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.82■□□□□ 0.44
CYP3A4P08684 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CYP3A4P08684 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CYP3A4P08684 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 AC098850.1-201ENST00000419919 790 ntBASIC17.82■□□□□ 0.44
CYP3A4P08684 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 KRT18P43-201ENST00000469825 1281 ntBASIC17.82■□□□□ 0.44
CYP3A4P08684 AP005018.1-201ENST00000525475 301 ntBASIC17.82■□□□□ 0.44
CYP3A4P08684 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.82■□□□□ 0.44
CYP3A4P08684 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.82■□□□□ 0.44
CYP3A4P08684 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.82■□□□□ 0.44
CYP3A4P08684 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.82■□□□□ 0.44
CYP3A4P08684 MIR8072-201ENST00000614241 80 ntBASIC17.82■□□□□ 0.44
CYP3A4P08684 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CYP3A4P08684 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CYP3A4P08684 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CYP3A4P08684 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CYP3A4P08684 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.82■□□□□ 0.44
CYP3A4P08684 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CYP3A4P08684 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.81■□□□□ 0.44
CYP3A4P08684 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.81■□□□□ 0.44
CYP3A4P08684 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.81■□□□□ 0.44
CYP3A4P08684 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.81■□□□□ 0.44
CYP3A4P08684 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.81■□□□□ 0.44
CYP3A4P08684 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.81■□□□□ 0.44
CYP3A4P08684 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
CYP3A4P08684 AC123567.1-201ENST00000548294 1261 ntBASIC17.81■□□□□ 0.44
CYP3A4P08684 AC036164.1-201ENST00000570544 333 ntBASIC17.81■□□□□ 0.44
CYP3A4P08684 AC015910.1-201ENST00000579400 975 ntBASIC17.81■□□□□ 0.44
CYP3A4P08684 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.81■□□□□ 0.44
CYP3A4P08684 TMEM261P1-201ENST00000604899 340 ntBASIC17.81■□□□□ 0.44
CYP3A4P08684 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CYP3A4P08684 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.81■□□□□ 0.44
CYP3A4P08684 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CYP3A4P08684 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CYP3A4P08684 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CYP3A4P08684 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CYP3A4P08684 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.8■□□□□ 0.44
CYP3A4P08684 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.8■□□□□ 0.44
CYP3A4P08684 MYCLP2-201ENST00000449268 967 ntBASIC17.8■□□□□ 0.44
CYP3A4P08684 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.8■□□□□ 0.44
CYP3A4P08684 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.8■□□□□ 0.44
CYP3A4P08684 AC008494.3-201ENST00000606615 944 ntBASIC17.8■□□□□ 0.44
CYP3A4P08684 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.8■□□□□ 0.44
CYP3A4P08684 AC007431.3-201ENST00000623221 587 ntBASIC17.8■□□□□ 0.44
CYP3A4P08684 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CYP3A4P08684 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.8■□□□□ 0.44
CYP3A4P08684 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CYP3A4P08684 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.8■□□□□ 0.44
CYP3A4P08684 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.8■□□□□ 0.44
CYP3A4P08684 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYP3A4P08684 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CYP3A4P08684 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CYP3A4P08684 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms