Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
APOBP04114 AC009084.3-201ENST00000623356 437 ntBASIC9.7□□□□□ -0.86
APOBP04114 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC9.7□□□□□ -0.86
APOBP04114 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC9.7□□□□□ -0.86
APOBP04114 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 AL805961.1-201ENST00000642026 753 ntBASIC9.7□□□□□ -0.86
APOBP04114 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
APOBP04114 AC004899.1-201ENST00000424687 1714 ntBASIC9.7□□□□□ -0.86
APOBP04114 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC9.7□□□□□ -0.86
APOBP04114 AC007881.3-201ENST00000608897 607 ntBASIC9.7□□□□□ -0.86
APOBP04114 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
APOBP04114 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 AC026316.1-201ENST00000398900 414 ntBASIC9.69□□□□□ -0.86
APOBP04114 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC9.69□□□□□ -0.86
APOBP04114 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 MIR4754-201ENST00000582477 89 ntBASIC9.69□□□□□ -0.86
APOBP04114 MIR4649-201ENST00000582839 64 ntBASIC9.69□□□□□ -0.86
APOBP04114 MIR6842-201ENST00000612539 65 ntBASIC9.69□□□□□ -0.86
APOBP04114 AC068587.8-201ENST00000641239 219 ntBASIC9.69□□□□□ -0.86
APOBP04114 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC9.69□□□□□ -0.86
APOBP04114 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 PHKG1P2-201ENST00000457537 863 ntBASIC9.69□□□□□ -0.86
APOBP04114 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC9.69□□□□□ -0.86
APOBP04114 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 CMC2-214ENST00000565925 640 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 TPM3P8-201ENST00000330554 643 ntBASIC9.69□□□□□ -0.86
APOBP04114 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC9.69□□□□□ -0.86
APOBP04114 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC9.69□□□□□ -0.86
APOBP04114 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC9.69□□□□□ -0.86
APOBP04114 AP001065.2-201ENST00000617205 644 ntBASIC9.69□□□□□ -0.86
APOBP04114 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 AP001002.3-201ENST00000623482 206 ntBASIC9.69□□□□□ -0.86
APOBP04114 AC009093.2-202ENST00000620513 2079 ntBASIC9.69□□□□□ -0.86
APOBP04114 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
APOBP04114 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC9.69□□□□□ -0.86
APOBP04114 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
APOBP04114 AC007787.1-201ENST00000588095 1583 ntBASIC9.69□□□□□ -0.86
APOBP04114 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC9.68□□□□□ -0.86
APOBP04114 POU5F1P6-201ENST00000466990 990 ntBASIC9.68□□□□□ -0.86
APOBP04114 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 TMCO5B-205ENST00000530020 894 ntBASIC9.68□□□□□ -0.86
APOBP04114 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms