Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC1P02654 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
APOC1P02654 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
APOC1P02654 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.22□□□□□ -0.13
APOC1P02654 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 AC016027.1-202ENST00000607927 1699 ntBASIC14.22□□□□□ -0.13
APOC1P02654 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC1P02654 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC1P02654 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOC1P02654 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 OR2I1P-210ENST00000642037 4691 ntBASIC14.21□□□□□ -0.13
APOC1P02654 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APOC1P02654 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.21□□□□□ -0.13
APOC1P02654 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
APOC1P02654 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APOC1P02654 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.21□□□□□ -0.13
APOC1P02654 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 PRYP6-201ENST00000514804 343 ntBASIC14.21□□□□□ -0.13
APOC1P02654 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.21□□□□□ -0.13
APOC1P02654 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.21□□□□□ -0.13
APOC1P02654 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
APOC1P02654 PDPK2P-202ENST00000562415 1191 ntBASIC14.21□□□□□ -0.13
APOC1P02654 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.21□□□□□ -0.13
APOC1P02654 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.21□□□□□ -0.13
APOC1P02654 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 AC073439.1-201ENST00000624121 1774 ntBASIC14.21□□□□□ -0.13
APOC1P02654 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC1P02654 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.21□□□□□ -0.14
APOC1P02654 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
APOC1P02654 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
APOC1P02654 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
APOC1P02654 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
APOC1P02654 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.21□□□□□ -0.14
APOC1P02654 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOC1P02654 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms