Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF40O75150 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF40O75150 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF40O75150 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF40O75150 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 AL592309.1-201ENST00000443127 649 ntBASIC17.33■□□□□ 0.36
RNF40O75150 AC067863.1-201ENST00000494933 530 ntBASIC17.33■□□□□ 0.36
RNF40O75150 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF40O75150 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
RNF40O75150 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.33■□□□□ 0.36
RNF40O75150 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF40O75150 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF40O75150 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF40O75150 DUX4L27-201ENST00000554796 1261 ntBASIC17.33■□□□□ 0.36
RNF40O75150 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF40O75150 MIR4745-201ENST00000577608 62 ntBASIC17.33■□□□□ 0.36
RNF40O75150 AC015911.4-201ENST00000588022 1070 ntBASIC17.33■□□□□ 0.36
RNF40O75150 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF40O75150 AL390955.2-201ENST00000603032 514 ntBASIC17.33■□□□□ 0.36
RNF40O75150 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF40O75150 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RNF40O75150 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF40O75150 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF40O75150 PRAL-201ENST00000624952 3286 ntBASIC17.32■□□□□ 0.36
RNF40O75150 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RNF40O75150 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF40O75150 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 TFAMP1-201ENST00000412727 736 ntBASIC17.32■□□□□ 0.36
RNF40O75150 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF40O75150 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 RN7SL589P-201ENST00000481268 310 ntBASIC17.32■□□□□ 0.36
RNF40O75150 AC079140.1-201ENST00000508039 487 ntBASIC17.32■□□□□ 0.36
RNF40O75150 AC093214.1-201ENST00000511688 1107 ntBASIC17.32■□□□□ 0.36
RNF40O75150 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF40O75150 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RNF40O75150 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF40O75150 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RNF40O75150 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF40O75150 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
RNF40O75150 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF40O75150 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RNF40O75150 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF40O75150 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 KRT18P32-201ENST00000424695 1287 ntBASIC17.31■□□□□ 0.36
RNF40O75150 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF40O75150 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF40O75150 AC069262.1-201ENST00000539058 672 ntBASIC17.31■□□□□ 0.36
RNF40O75150 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF40O75150 AC239800.4-201ENST00000603712 296 ntBASIC17.31■□□□□ 0.36
RNF40O75150 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF40O75150 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF40O75150 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF40O75150 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms