Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
EXTL3O43909 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EXTL3O43909 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
EXTL3O43909 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EXTL3O43909 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EXTL3O43909 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
EXTL3O43909 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EXTL3O43909 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.29■□□□□ 0.36
EXTL3O43909 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EXTL3O43909 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
EXTL3O43909 Z97205.2-201ENST00000564697 1639 ntBASIC17.29■□□□□ 0.36
EXTL3O43909 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
EXTL3O43909 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.28■□□□□ 0.36
EXTL3O43909 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 TARDBPP1-201ENST00000442013 1203 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.28■□□□□ 0.36
EXTL3O43909 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.28■□□□□ 0.36
EXTL3O43909 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.28■□□□□ 0.36
EXTL3O43909 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 AC190387.1-201ENST00000551683 408 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.28■□□□□ 0.36
EXTL3O43909 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.28■□□□□ 0.36
EXTL3O43909 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 AF228730.6-201ENST00000641497 218 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 AC084121.3-201ENST00000641716 218 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 AC105233.6-201ENST00000642093 218 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.28■□□□□ 0.36
EXTL3O43909 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
EXTL3O43909 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EXTL3O43909 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.28■□□□□ 0.36
EXTL3O43909 AC022144.1-201ENST00000602255 1580 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 AL607033.1-201ENST00000623900 1599 ntBASIC17.28■□□□□ 0.36
EXTL3O43909 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EXTL3O43909 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.27■□□□□ 0.36
EXTL3O43909 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 AC007950.2-201ENST00000615045 2347 ntBASIC17.27■□□□□ 0.36
EXTL3O43909 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.27■□□□□ 0.36
EXTL3O43909 AC015922.1-201ENST00000421102 1152 ntBASIC17.27■□□□□ 0.36
EXTL3O43909 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.27■□□□□ 0.36
EXTL3O43909 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.27■□□□□ 0.36
EXTL3O43909 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.27■□□□□ 0.36
EXTL3O43909 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.27■□□□□ 0.36
EXTL3O43909 AL109936.8-201ENST00000641772 604 ntBASIC17.27■□□□□ 0.36
EXTL3O43909 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
EXTL3O43909 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EXTL3O43909 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
EXTL3O43909 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.27■□□□□ 0.35
EXTL3O43909 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
EXTL3O43909 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
EXTL3O43909 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.27■□□□□ 0.35
EXTL3O43909 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
EXTL3O43909 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.27■□□□□ 0.35
EXTL3O43909 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
EXTL3O43909 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EXTL3O43909 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
EXTL3O43909 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
EXTL3O43909 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.26■□□□□ 0.35
EXTL3O43909 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EXTL3O43909 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms