Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
O00370 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.05■□□□□ 0.32
O00370 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.05■□□□□ 0.32
O00370 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
O00370 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.05■□□□□ 0.32
O00370 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.05■□□□□ 0.32
O00370 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
O00370 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
O00370 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.05■□□□□ 0.32
O00370 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.04■□□□□ 0.32
O00370 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
O00370 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
O00370 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.04■□□□□ 0.32
O00370 MTND6P24-201ENST00000440466 518 ntBASIC17.04■□□□□ 0.32
O00370 EEF1DP4-201ENST00000446006 880 ntBASIC17.04■□□□□ 0.32
O00370 KLF2P3-201ENST00000451977 1087 ntBASIC17.04■□□□□ 0.32
O00370 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 AC125807.1-201ENST00000483097 614 ntBASIC17.04■□□□□ 0.32
O00370 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.04■□□□□ 0.32
O00370 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
O00370 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
O00370 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
O00370 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
O00370 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
O00370 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.03■□□□□ 0.32
O00370 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.03■□□□□ 0.32
O00370 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.03■□□□□ 0.32
O00370 SPDYE17-201ENST00000412399 783 ntBASIC17.03■□□□□ 0.32
O00370 FAM86GP-201ENST00000448322 971 ntBASIC17.03■□□□□ 0.32
O00370 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.03■□□□□ 0.32
O00370 AC067863.1-201ENST00000494933 530 ntBASIC17.03■□□□□ 0.32
O00370 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.03■□□□□ 0.32
O00370 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
O00370 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
O00370 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.03■□□□□ 0.32
O00370 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
O00370 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
O00370 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
O00370 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.02■□□□□ 0.32
O00370 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
O00370 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
O00370 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
O00370 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms