Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 AC004987.2-201ENST00000395959 1148 ntBASIC15.82■□□□□ 0.12
TLR4O00206 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TLR4O00206 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TLR4O00206 TTTY23B-201ENST00000442790 549 ntBASIC15.82■□□□□ 0.12
TLR4O00206 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.82■□□□□ 0.12
TLR4O00206 ACA64.2-201ENST00000459014 129 ntBASIC15.82■□□□□ 0.12
TLR4O00206 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.82■□□□□ 0.12
TLR4O00206 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.82■□□□□ 0.12
TLR4O00206 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.82■□□□□ 0.12
TLR4O00206 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.82■□□□□ 0.12
TLR4O00206 RAB43P1-201ENST00000561790 589 ntBASIC15.82■□□□□ 0.12
TLR4O00206 RARRES2P5-201ENST00000564013 466 ntBASIC15.82■□□□□ 0.12
TLR4O00206 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.82■□□□□ 0.12
TLR4O00206 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.82■□□□□ 0.12
TLR4O00206 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.82■□□□□ 0.12
TLR4O00206 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
TLR4O00206 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.82■□□□□ 0.12
TLR4O00206 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TLR4O00206 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.82■□□□□ 0.12
TLR4O00206 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.81■□□□□ 0.12
TLR4O00206 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 AC079776.1-201ENST00000401540 1152 ntBASIC15.81■□□□□ 0.12
TLR4O00206 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TLR4O00206 AC112492.5-201ENST00000421897 457 ntBASIC15.81■□□□□ 0.12
TLR4O00206 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.81■□□□□ 0.12
TLR4O00206 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.81■□□□□ 0.12
TLR4O00206 AC104596.2-201ENST00000512793 793 ntBASIC15.81■□□□□ 0.12
TLR4O00206 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.81■□□□□ 0.12
TLR4O00206 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.81■□□□□ 0.12
TLR4O00206 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.81■□□□□ 0.12
TLR4O00206 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.81■□□□□ 0.12
TLR4O00206 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.81■□□□□ 0.12
TLR4O00206 AL691432.1-201ENST00000596308 1422 ntBASIC15.81■□□□□ 0.12
TLR4O00206 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.81■□□□□ 0.12
TLR4O00206 AC092171.3-201ENST00000610122 2651 ntBASIC15.81■□□□□ 0.12
TLR4O00206 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.81■□□□□ 0.12
TLR4O00206 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TLR4O00206 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TLR4O00206 LINC02199-201ENST00000506655 2702 ntBASIC15.81■□□□□ 0.12
TLR4O00206 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.8■□□□□ 0.12
TLR4O00206 AC006449.5-201ENST00000610658 2098 ntBASIC15.8■□□□□ 0.12
TLR4O00206 AC026691.1-201ENST00000602502 2017 ntBASIC15.8■□□□□ 0.12
TLR4O00206 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.8■□□□□ 0.12
TLR4O00206 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.8■□□□□ 0.12
TLR4O00206 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TLR4O00206 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TLR4O00206 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TLR4O00206 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
TLR4O00206 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TLR4O00206 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.8■□□□□ 0.12
TLR4O00206 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TLR4O00206 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TLR4O00206 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.8■□□□□ 0.12
TLR4O00206 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.8■□□□□ 0.12
TLR4O00206 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms