Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RGPD3A6NKT7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 RPL18AP3-201ENST00000462885 528 ntBASIC19.62■□□□□ 0.73
RGPD3A6NKT7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 NAP1L6-202ENST00000641404 1222 ntBASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 CLUHP2-201ENST00000426660 1303 ntBASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 CAP2P1-201ENST00000557743 1390 ntBASIC19.62■□□□□ 0.73
RGPD3A6NKT7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 PIN4P1-201ENST00000451079 396 ntBASIC19.62■□□□□ 0.73
RGPD3A6NKT7 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RGPD3A6NKT7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 AC010141.1-201ENST00000411585 623 ntBASIC19.61■□□□□ 0.73
RGPD3A6NKT7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RGPD3A6NKT7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.61■□□□□ 0.73
RGPD3A6NKT7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 RPL7P35-201ENST00000446943 740 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC079112.1-201ENST00000454972 939 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms