Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AL450487.1-201ENST00000426799 995 ntBASIC16.99■□□□□ 0.31
RCCD1A6NED2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AC099522.2-201ENST00000607001 744 ntBASIC16.99■□□□□ 0.31
RCCD1A6NED2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AC126365.1-201ENST00000578585 1514 ntBASIC16.99■□□□□ 0.31
RCCD1A6NED2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.99■□□□□ 0.31
RCCD1A6NED2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RCCD1A6NED2 AC023024.2-201ENST00000623561 1993 ntBASIC16.98■□□□□ 0.31
RCCD1A6NED2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCCD1A6NED2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCCD1A6NED2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 AC013726.1-201ENST00000563747 2285 ntBASIC16.98■□□□□ 0.31
RCCD1A6NED2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 AP002472.1-201ENST00000577490 586 ntBASIC16.98■□□□□ 0.31
RCCD1A6NED2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCCD1A6NED2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RCCD1A6NED2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RCCD1A6NED2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AC007191.1-201ENST00000623179 2995 ntBASIC16.97■□□□□ 0.31
RCCD1A6NED2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AC079776.4-201ENST00000511039 504 ntBASIC16.97■□□□□ 0.31
RCCD1A6NED2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AC243562.2-201ENST00000561247 970 ntBASIC16.97■□□□□ 0.31
RCCD1A6NED2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.97■□□□□ 0.31
RCCD1A6NED2 AC010326.4-201ENST00000604665 891 ntBASIC16.97■□□□□ 0.31
RCCD1A6NED2 Z83851.2-201ENST00000609564 659 ntBASIC16.97■□□□□ 0.31
RCCD1A6NED2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms