Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 AC127383.1-201ENST00000444697 1800 ntBASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 AC004987.2-201ENST00000395959 1148 ntBASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 AC079140.1-201ENST00000508039 487 ntBASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV7S3A2A0A539 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CYP4F24P-201ENST00000586049 1580 ntBASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 AC026120.1-201ENST00000611536 926 ntBASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 TCAF2P1-201ENST00000291129 2421 ntBASIC16.23■□□□□ 0.19
TCRBV7S3A2A0A539 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 PGAM5P1-201ENST00000518923 814 ntBASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 CICP24-201ENST00000605464 2705 ntBASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV7S3A2A0A539 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms