Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM56-RWDD3S4R434 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56-RWDD3S4R434 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM56-RWDD3S4R434 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56-RWDD3S4R434 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM56-RWDD3S4R434 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM56-RWDD3S4R434 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56-RWDD3S4R434 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM56-RWDD3S4R434 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56-RWDD3S4R434 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56-RWDD3S4R434 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56-RWDD3S4R434 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM56-RWDD3S4R434 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM56-RWDD3S4R434 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM56-RWDD3S4R434 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM56-RWDD3S4R434 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM56-RWDD3S4R434 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TMEM56-RWDD3S4R434 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM56-RWDD3S4R434 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 HLA-L-211ENST00000482052 1765 ntBASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM56-RWDD3S4R434 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM56-RWDD3S4R434 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM56-RWDD3S4R434 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM56-RWDD3S4R434 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM56-RWDD3S4R434 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM56-RWDD3S4R434 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.09■□□□□ 0.65
TMEM56-RWDD3S4R434 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TMEM56-RWDD3S4R434 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM56-RWDD3S4R434 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM56-RWDD3S4R434 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TMEM56-RWDD3S4R434 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM56-RWDD3S4R434 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 AC025884.2-201ENST00000553429 711 ntBASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM56-RWDD3S4R434 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM56-RWDD3S4R434 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM56-RWDD3S4R434 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM56-RWDD3S4R434 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM56-RWDD3S4R434 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TMEM56-RWDD3S4R434 MIR3960-201ENST00000583311 91 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms