Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KDM3AQ9Y4C1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
KDM3AQ9Y4C1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KDM3AQ9Y4C1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KDM3AQ9Y4C1 AC142381.3-201ENST00000568208 1670 ntBASIC26.51■■□□□ 1.83
KDM3AQ9Y4C1 FOXO3B-201ENST00000395675 1928 ntBASIC26.51■■□□□ 1.83
KDM3AQ9Y4C1 AC022211.4-201ENST00000625094 2161 ntBASIC26.51■■□□□ 1.83
KDM3AQ9Y4C1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KDM3AQ9Y4C1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 AC022616.5-201ENST00000518796 181 ntBASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM3AQ9Y4C1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM3AQ9Y4C1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.48■■□□□ 1.83
KDM3AQ9Y4C1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.48■■□□□ 1.83
KDM3AQ9Y4C1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KDM3AQ9Y4C1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KDM3AQ9Y4C1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.48■■□□□ 1.83
KDM3AQ9Y4C1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KDM3AQ9Y4C1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
KDM3AQ9Y4C1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.47■■□□□ 1.83
KDM3AQ9Y4C1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KDM3AQ9Y4C1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KDM3AQ9Y4C1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM3AQ9Y4C1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KDM3AQ9Y4C1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.46■■□□□ 1.83
KDM3AQ9Y4C1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM3AQ9Y4C1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KDM3AQ9Y4C1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KDM3AQ9Y4C1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
KDM3AQ9Y4C1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
KDM3AQ9Y4C1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.45■■□□□ 1.82
KDM3AQ9Y4C1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 Z92544.1-202ENST00000571933 1220 ntBASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KDM3AQ9Y4C1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
KDM3AQ9Y4C1 MIR6089-201ENST00000616698 64 ntBASIC26.42■■□□□ 1.82
KDM3AQ9Y4C1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.42■■□□□ 1.82
KDM3AQ9Y4C1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KDM3AQ9Y4C1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KDM3AQ9Y4C1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
KDM3AQ9Y4C1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KDM3AQ9Y4C1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM3AQ9Y4C1 AL592295.1-201ENST00000400984 884 ntBASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
KDM3AQ9Y4C1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.39■■□□□ 1.82
KDM3AQ9Y4C1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KDM3AQ9Y4C1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KDM3AQ9Y4C1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
KDM3AQ9Y4C1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
KDM3AQ9Y4C1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM3AQ9Y4C1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM3AQ9Y4C1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM3AQ9Y4C1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms