Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SEC61A2Q9H9S3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.91■□□□□ 0.94
SEC61A2Q9H9S3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEC61A2Q9H9S3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SEC61A2Q9H9S3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SEC61A2Q9H9S3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEC61A2Q9H9S3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SEC61A2Q9H9S3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEC61A2Q9H9S3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SEC61A2Q9H9S3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
SEC61A2Q9H9S3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEC61A2Q9H9S3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEC61A2Q9H9S3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.88■□□□□ 0.93
SEC61A2Q9H9S3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A2Q9H9S3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A2Q9H9S3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A2Q9H9S3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEC61A2Q9H9S3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SEC61A2Q9H9S3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEC61A2Q9H9S3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 AP003733.4-201ENST00000623785 1697 ntBASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEC61A2Q9H9S3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEC61A2Q9H9S3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEC61A2Q9H9S3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.83■□□□□ 0.93
SEC61A2Q9H9S3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEC61A2Q9H9S3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.83■□□□□ 0.93
SEC61A2Q9H9S3 AC010980.1-201ENST00000587192 1142 ntBASIC20.83■□□□□ 0.93
SEC61A2Q9H9S3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEC61A2Q9H9S3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 RPS2P7-201ENST00000447334 885 ntBASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 BHLHE23-202ENST00000612929 1109 ntBASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 FOXO3B-201ENST00000395675 1928 ntBASIC20.82■□□□□ 0.92
SEC61A2Q9H9S3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 AC139795.1-202ENST00000500444 432 ntBASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC61A2Q9H9S3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms