Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC092803.2-201ENST00000564287 1899 ntBASIC25.67■■□□□ 1.7
RNF39Q9H2S5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF39Q9H2S5 AC021242.3-201ENST00000607598 1377 ntBASIC25.66■■□□□ 1.7
RNF39Q9H2S5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 UNC93B8-201ENST00000511903 705 ntBASIC25.65■■□□□ 1.7
RNF39Q9H2S5 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 AC097639.1-201ENST00000565519 1891 ntBASIC25.65■■□□□ 1.7
RNF39Q9H2S5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF39Q9H2S5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF39Q9H2S5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.64■■□□□ 1.7
RNF39Q9H2S5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.64■■□□□ 1.7
RNF39Q9H2S5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF39Q9H2S5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.64■■□□□ 1.7
RNF39Q9H2S5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.64■■□□□ 1.69
RNF39Q9H2S5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RNF39Q9H2S5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF39Q9H2S5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF39Q9H2S5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RNF39Q9H2S5 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF39Q9H2S5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RNF39Q9H2S5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF39Q9H2S5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 AC011551.1-201ENST00000614101 683 ntBASIC25.61■■□□□ 1.69
RNF39Q9H2S5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF39Q9H2S5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.6■■□□□ 1.69
RNF39Q9H2S5 AC005786.4-201ENST00000623369 682 ntBASIC25.6■■□□□ 1.69
RNF39Q9H2S5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF39Q9H2S5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RNF39Q9H2S5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.58■■□□□ 1.69
RNF39Q9H2S5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 TSPY9P-201ENST00000440215 945 ntBASIC25.57■■□□□ 1.68
RNF39Q9H2S5 TSPY11P-201ENST00000442607 1045 ntBASIC25.57■■□□□ 1.68
RNF39Q9H2S5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.57■■□□□ 1.68
RNF39Q9H2S5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RNF39Q9H2S5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RNF39Q9H2S5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF39Q9H2S5 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF39Q9H2S5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.56■■□□□ 1.68
RNF39Q9H2S5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.56■■□□□ 1.68
RNF39Q9H2S5 AC092028.1-203ENST00000608262 953 ntBASIC25.56■■□□□ 1.68
RNF39Q9H2S5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF39Q9H2S5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF39Q9H2S5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms