Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE2Q96FN4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 MIR6089-201ENST00000616698 64 ntBASIC20.22■□□□□ 0.83
CPNE2Q96FN4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.22■□□□□ 0.83
CPNE2Q96FN4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 LINC00543-201ENST00000567234 1845 ntBASIC20.21■□□□□ 0.83
CPNE2Q96FN4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 AC093536.1-201ENST00000569153 554 ntBASIC20.21■□□□□ 0.83
CPNE2Q96FN4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE2Q96FN4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE2Q96FN4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 AC007029.1-201ENST00000604183 313 ntBASIC20.19■□□□□ 0.82
CPNE2Q96FN4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE2Q96FN4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 AC133561.1-201ENST00000568600 2415 ntBASIC20.18■□□□□ 0.82
CPNE2Q96FN4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE2Q96FN4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE2Q96FN4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE2Q96FN4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.16■□□□□ 0.82
CPNE2Q96FN4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CPNE2Q96FN4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE2Q96FN4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CPNE2Q96FN4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE2Q96FN4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE2Q96FN4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPNE2Q96FN4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE2Q96FN4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE2Q96FN4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.13■□□□□ 0.81
CPNE2Q96FN4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE2Q96FN4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CPNE2Q96FN4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE2Q96FN4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE2Q96FN4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.12■□□□□ 0.81
CPNE2Q96FN4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms