Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SLC44A1Q8WWI5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.57■■□□□ 1.36
SLC44A1Q8WWI5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SLC44A1Q8WWI5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 AC068473.5-201ENST00000616428 2072 ntBASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.54■■□□□ 1.36
SLC44A1Q8WWI5 ABCB10P4-201ENST00000566803 2184 ntBASIC23.54■■□□□ 1.36
SLC44A1Q8WWI5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SLC44A1Q8WWI5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 HLA-L-211ENST00000482052 1765 ntBASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 DUSP8P5-201ENST00000422884 1815 ntBASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 RP9P-202ENST00000450133 1212 ntBASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 ECEL1P2-201ENST00000461596 1295 ntBASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 AC093536.1-201ENST00000569153 554 ntBASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
SLC44A1Q8WWI5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SLC44A1Q8WWI5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SLC44A1Q8WWI5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms