Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 AL139125.2-201ENST00000623134 1869 ntBASIC19.33■□□□□ 0.68
ZNF439Q8NDP4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 MIR6089-201ENST00000616698 64 ntBASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF439Q8NDP4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF439Q8NDP4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 RPS2P7-201ENST00000447334 885 ntBASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 DUX4L9-201ENST00000449051 1259 ntBASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 AC018755.3-202ENST00000596210 929 ntBASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF439Q8NDP4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 FOXO3B-201ENST00000395675 1928 ntBASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF439Q8NDP4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF439Q8NDP4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 AC093323.1-202ENST00000635031 2045 ntBASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 KRT18P60-201ENST00000312876 1297 ntBASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 ABHD17AP5-201ENST00000580133 923 ntBASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 MIR6765-201ENST00000614092 87 ntBASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 AC129492.7-201ENST00000622992 756 ntBASIC19.27■□□□□ 0.68
ZNF439Q8NDP4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF439Q8NDP4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF439Q8NDP4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF439Q8NDP4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF439Q8NDP4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF439Q8NDP4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNF439Q8NDP4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
ZNF439Q8NDP4 AC087393.1-201ENST00000582896 145 ntBASIC19.25■□□□□ 0.67
ZNF439Q8NDP4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF439Q8NDP4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF439Q8NDP4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF439Q8NDP4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF439Q8NDP4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF439Q8NDP4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms