Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.43■□□□□ 0.7
C11orf42Q8N5U0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
C11orf42Q8N5U0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf42Q8N5U0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 AC103834.1-201ENST00000520383 144 ntBASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 FOXO3B-201ENST00000395675 1928 ntBASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf42Q8N5U0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C11orf42Q8N5U0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
C11orf42Q8N5U0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.39■□□□□ 0.7
C11orf42Q8N5U0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.39■□□□□ 0.7
C11orf42Q8N5U0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
C11orf42Q8N5U0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 MIR4508-201ENST00000584178 70 ntBASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 AC020928.2-201ENST00000588717 2197 ntBASIC19.38■□□□□ 0.69
C11orf42Q8N5U0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C11orf42Q8N5U0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 AL592295.1-201ENST00000400984 884 ntBASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C11orf42Q8N5U0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf42Q8N5U0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 AC022616.5-201ENST00000518796 181 ntBASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf42Q8N5U0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms