Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRK2Q5S007 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRK2Q5S007 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRK2Q5S007 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LRRK2Q5S007 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LRRK2Q5S007 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRK2Q5S007 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRK2Q5S007 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LRRK2Q5S007 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRK2Q5S007 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.8■□□□□ 0.92
LRRK2Q5S007 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRK2Q5S007 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRK2Q5S007 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRK2Q5S007 ABHD17AP1-201ENST00000358206 933 ntBASIC20.79■□□□□ 0.92
LRRK2Q5S007 AC008764.7-201ENST00000593779 1081 ntBASIC20.79■□□□□ 0.92
LRRK2Q5S007 AL137784.2-201ENST00000607332 1000 ntBASIC20.79■□□□□ 0.92
LRRK2Q5S007 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRK2Q5S007 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.79■□□□□ 0.92
LRRK2Q5S007 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRK2Q5S007 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRK2Q5S007 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LRRK2Q5S007 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRK2Q5S007 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRK2Q5S007 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRK2Q5S007 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LRRK2Q5S007 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRK2Q5S007 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRK2Q5S007 AL031602.1-201ENST00000633169 911 ntBASIC20.77■□□□□ 0.92
LRRK2Q5S007 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.77■□□□□ 0.92
LRRK2Q5S007 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRRK2Q5S007 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LRRK2Q5S007 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LRRK2Q5S007 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LRRK2Q5S007 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK2Q5S007 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK2Q5S007 AC011298.3-201ENST00000615796 283 ntBASIC20.76■□□□□ 0.91
LRRK2Q5S007 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRK2Q5S007 SERBP1P1-201ENST00000396021 1160 ntBASIC20.75■□□□□ 0.91
LRRK2Q5S007 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRK2Q5S007 DUX4L19-201ENST00000557448 1267 ntBASIC20.75■□□□□ 0.91
LRRK2Q5S007 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.75■□□□□ 0.91
LRRK2Q5S007 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRK2Q5S007 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK2Q5S007 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRK2Q5S007 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK2Q5S007 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK2Q5S007 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L2-201ENST00000561772 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L6-201ENST00000626483 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L1-201ENST00000627662 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L8-201ENST00000629013 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L3-201ENST00000630187 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L7-201ENST00000630678 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 DUX4L5-201ENST00000630834 1275 ntBASIC20.74■□□□□ 0.91
LRRK2Q5S007 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LRRK2Q5S007 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK2Q5S007 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRK2Q5S007 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRK2Q5S007 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRK2Q5S007 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRK2Q5S007 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRK2Q5S007 KRT18P5-201ENST00000436075 1291 ntBASIC20.73■□□□□ 0.91
LRRK2Q5S007 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK2Q5S007 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRK2Q5S007 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRK2Q5S007 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK2Q5S007 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
LRRK2Q5S007 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRK2Q5S007 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRK2Q5S007 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRK2Q5S007 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRK2Q5S007 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRK2Q5S007 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LRRK2Q5S007 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRK2Q5S007 AC066615.1-201ENST00000640911 628 ntBASIC20.71■□□□□ 0.91
LRRK2Q5S007 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LRRK2Q5S007 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRK2Q5S007 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRK2Q5S007 AL449106.1-201ENST00000608517 1980 ntBASIC20.7■□□□□ 0.9
LRRK2Q5S007 YBX1P1-201ENST00000445822 960 ntBASIC20.7■□□□□ 0.9
LRRK2Q5S007 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRK2Q5S007 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRK2Q5S007 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRK2Q5S007 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRK2Q5S007 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRK2Q5S007 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRK2Q5S007 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
LRRK2Q5S007 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRK2Q5S007 HLA-L-209ENST00000420110 1011 ntBASIC20.7■□□□□ 0.9
LRRK2Q5S007 AL138724.1-201ENST00000606771 1088 ntBASIC20.7■□□□□ 0.9
LRRK2Q5S007 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRK2Q5S007 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRK2Q5S007 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms