Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 SPS22YCL048W 1392 nt3.93□□□□□ -1.78
LSM6Q06406 PUS1YPL212C 1635 nt3.93□□□□□ -1.78
LSM6Q06406 AUA1YFL010W-A 285 nt3.93□□□□□ -1.78
LSM6Q06406 LIA1YJR070C 978 nt3.93□□□□□ -1.78
LSM6Q06406 YMR295CYMR295C 594 nt3.93□□□□□ -1.78
LSM6Q06406 RNH201YNL072W 924 nt3.93□□□□□ -1.78
LSM6Q06406 CSG2YBR036C 1233 nt3.93□□□□□ -1.78
LSM6Q06406 RSC2YLR357W 2670 nt3.93□□□□□ -1.78
LSM6Q06406 BUL1YMR275C 2931 nt3.92□□□□□ -1.78
LSM6Q06406 ERG8YMR220W 1356 nt3.92□□□□□ -1.78
LSM6Q06406 TEF1YPR080W 1377 nt3.92□□□□□ -1.78
LSM6Q06406 TEF2YBR118W 1377 nt3.92□□□□□ -1.78
LSM6Q06406 RCK1YGL158W 1539 nt3.92□□□□□ -1.78
LSM6Q06406 MHF2YDL160C-A 243 nt3.92□□□□□ -1.78
LSM6Q06406 GCG1YER163C 699 nt3.92□□□□□ -1.78
LSM6Q06406 YGL072CYGL072C 360 nt3.92□□□□□ -1.78
LSM6Q06406 LCL3YGL085W 825 nt3.92□□□□□ -1.78
LSM6Q06406 GTO1YGR154C 1071 nt3.92□□□□□ -1.78
LSM6Q06406 TSR2YLR435W 618 nt3.92□□□□□ -1.78
LSM6Q06406 RPR1RPR1 369 nt3.92□□□□□ -1.78
LSM6Q06406 MRP21YBL090W 534 nt3.92□□□□□ -1.78
LSM6Q06406 WTM2YOR229W 1404 nt3.92□□□□□ -1.78
LSM6Q06406 STE20YHL007C 2820 nt3.92□□□□□ -1.78
LSM6Q06406 CUE2YKL090W 1332 nt3.92□□□□□ -1.78
LSM6Q06406 PRP43YGL120C 2304 nt3.92□□□□□ -1.78
LSM6Q06406 HRP1YOL123W 1605 nt3.92□□□□□ -1.78
LSM6Q06406 PRO2YOR323C 1371 nt3.91□□□□□ -1.78
LSM6Q06406 YGR125WYGR125W 3111 nt3.91□□□□□ -1.78
LSM6Q06406 UTP7YER082C 1665 nt3.91□□□□□ -1.78
LSM6Q06406 ASK10YGR097W 3441 nt3.91□□□□□ -1.78
LSM6Q06406 DRS1YLL008W 2259 nt3.91□□□□□ -1.78
LSM6Q06406 YDR541CYDR541C 1035 nt3.91□□□□□ -1.78
LSM6Q06406 NPY1YGL067W 1155 nt3.91□□□□□ -1.78
LSM6Q06406 RPL28YGL103W 450 nt3.91□□□□□ -1.78
LSM6Q06406 ACF2YLR144C 2340 nt3.91□□□□□ -1.78
LSM6Q06406 CAF40YNL288W 1122 nt3.91□□□□□ -1.78
LSM6Q06406 YOR024WYOR024W 324 nt3.91□□□□□ -1.78
LSM6Q06406 CTS1YLR286C 1689 nt3.9□□□□□ -1.78
LSM6Q06406 TRK2YKR050W 2670 nt3.9□□□□□ -1.78
LSM6Q06406 PDR10YOR328W 4695 nt3.9□□□□□ -1.78
LSM6Q06406 LEU5YHR002W 1074 nt3.9□□□□□ -1.79
LSM6Q06406 RPA49YNL248C 1248 nt3.9□□□□□ -1.79
LSM6Q06406 TFC7YOR110W 1308 nt3.9□□□□□ -1.79
LSM6Q06406 PAP1YKR002W 1707 nt3.9□□□□□ -1.79
LSM6Q06406 DNF2YDR093W 4839 nt3.89□□□□□ -1.79
LSM6Q06406 ADE13YLR359W 1449 nt3.89□□□□□ -1.79
LSM6Q06406 CHS5YLR330W 2016 nt3.89□□□□□ -1.79
LSM6Q06406 YDR187CYDR187C 519 nt3.89□□□□□ -1.79
LSM6Q06406 SUA5YGL169W 1281 nt3.89□□□□□ -1.79
LSM6Q06406 APS3YJL024C 585 nt3.89□□□□□ -1.79
LSM6Q06406 SEC17YBL050W 879 nt3.89□□□□□ -1.79
LSM6Q06406 ISU2YOR226C 471 nt3.89□□□□□ -1.79
LSM6Q06406 QDR1YIL120W 1692 nt3.89□□□□□ -1.79
LSM6Q06406 DDC1YPL194W 1839 nt3.88□□□□□ -1.79
LSM6Q06406 VMS1YDR049W 1899 nt3.88□□□□□ -1.79
LSM6Q06406 FOB1YDR110W 1701 nt3.88□□□□□ -1.79
LSM6Q06406 YNL017CYNL017C 339 nt3.88□□□□□ -1.79
LSM6Q06406 YNL042W-BYNL042W-B 258 nt3.88□□□□□ -1.79
LSM6Q06406 YBR027CYBR027C 333 nt3.88□□□□□ -1.79
LSM6Q06406 PAU21YOR394W 495 nt3.88□□□□□ -1.79
LSM6Q06406 snR17bsnR17b 332 nt3.88□□□□□ -1.79
LSM6Q06406 PAU22YPL282C 495 nt3.88□□□□□ -1.79
LSM6Q06406 TFB4YPR056W 1017 nt3.88□□□□□ -1.79
LSM6Q06406 YBR126W-AYBR126W-A 207 nt3.88□□□□□ -1.79
LSM6Q06406 GLE1YDL207W 1617 nt3.88□□□□□ -1.79
LSM6Q06406 PAB1YER165W 1734 nt3.87□□□□□ -1.79
LSM6Q06406 UTP9YHR196W 1728 nt3.87□□□□□ -1.79
LSM6Q06406 CTS2YDR371W 1536 nt3.87□□□□□ -1.79
LSM6Q06406 RIB1YBL033C 1038 nt3.87□□□□□ -1.79
LSM6Q06406 PPR1YLR014C 2715 nt3.87□□□□□ -1.79
LSM6Q06406 ARN2YHL047C 1863 nt3.87□□□□□ -1.79
LSM6Q06406 AXL2YIL140W 2472 nt3.87□□□□□ -1.79
LSM6Q06406 YJL206CYJL206C 2277 nt3.87□□□□□ -1.79
LSM6Q06406 SEC9YGR009C 1956 nt3.86□□□□□ -1.79
LSM6Q06406 YOX1YML027W 1158 nt3.86□□□□□ -1.79
LSM6Q06406 ZIM17YNL310C 525 nt3.86□□□□□ -1.79
LSM6Q06406 RBA50YDR527W 1320 nt3.86□□□□□ -1.79
LSM6Q06406 GPR1YDL035C 2886 nt3.86□□□□□ -1.79
LSM6Q06406 KIP2YPL155C 2121 nt3.86□□□□□ -1.79
LSM6Q06406 ARB1YER036C 1833 nt3.86□□□□□ -1.79
LSM6Q06406 YDL129WYDL129W 876 nt3.85□□□□□ -1.79
LSM6Q06406 PUP2YGR253C 783 nt3.85□□□□□ -1.79
LSM6Q06406 CTR2YHR175W 570 nt3.85□□□□□ -1.79
LSM6Q06406 VPS24YKL041W 675 nt3.85□□□□□ -1.79
LSM6Q06406 TEF4YKL081W 1239 nt3.85□□□□□ -1.79
LSM6Q06406 CDC21YOR074C 915 nt3.85□□□□□ -1.79
LSM6Q06406 PUP1YOR157C 786 nt3.85□□□□□ -1.79
LSM6Q06406 SCO1YBR037C 888 nt3.85□□□□□ -1.79
LSM6Q06406 YPR196WYPR196W 1413 nt3.85□□□□□ -1.79
LSM6Q06406 YIL067CYIL067C 2037 nt3.85□□□□□ -1.79
LSM6Q06406 UGO1YDR470C 1509 nt3.85□□□□□ -1.79
LSM6Q06406 PEX29YDR479C 1665 nt3.84□□□□□ -1.79
LSM6Q06406 PGM2YMR105C 1710 nt3.84□□□□□ -1.79
LSM6Q06406 YFL034WYFL034W 3222 nt3.84□□□□□ -1.79
LSM6Q06406 SRP101YDR292C 1866 nt3.84□□□□□ -1.79
LSM6Q06406 CRT10YOL063C 2874 nt3.84□□□□□ -1.79
LSM6Q06406 YDR015CYDR015C 240 nt3.84□□□□□ -1.79
LSM6Q06406 UBC11YOR339C 471 nt3.84□□□□□ -1.79
LSM6Q06406 CDC28YBR160W 897 nt3.84□□□□□ -1.79
LSM6Q06406 SFI1YLL003W 2841 nt3.84□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms