Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLNS1AP54105 HLA-V-202ENST00000446817 847 ntBASIC23.09■■□□□ 1.29
CLNS1AP54105 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.09■■□□□ 1.29
CLNS1AP54105 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.09■■□□□ 1.29
CLNS1AP54105 SLC25A24-204ENST00000569674 2357 ntBASIC23.09■■□□□ 1.29
CLNS1AP54105 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.09■■□□□ 1.29
CLNS1AP54105 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.09■■□□□ 1.29
CLNS1AP54105 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLNS1AP54105 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CLNS1AP54105 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLNS1AP54105 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLNS1AP54105 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLNS1AP54105 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CLNS1AP54105 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLNS1AP54105 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLNS1AP54105 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CLNS1AP54105 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.07■■□□□ 1.28
CLNS1AP54105 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.07■■□□□ 1.28
CLNS1AP54105 ZNRF2P2-203ENST00000454624 420 ntBASIC23.07■■□□□ 1.28
CLNS1AP54105 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.07■■□□□ 1.28
CLNS1AP54105 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLNS1AP54105 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.07■■□□□ 1.28
CLNS1AP54105 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CLNS1AP54105 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.06■■□□□ 1.28
CLNS1AP54105 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CLNS1AP54105 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CLNS1AP54105 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLNS1AP54105 DUSP8P5-201ENST00000422884 1815 ntBASIC23.06■■□□□ 1.28
CLNS1AP54105 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.06■■□□□ 1.28
CLNS1AP54105 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLNS1AP54105 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLNS1AP54105 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLNS1AP54105 AL359504.2-201ENST00000605506 1601 ntBASIC23.06■■□□□ 1.28
CLNS1AP54105 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CLNS1AP54105 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLNS1AP54105 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.05■■□□□ 1.28
CLNS1AP54105 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
CLNS1AP54105 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLNS1AP54105 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLNS1AP54105 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLNS1AP54105 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.05■■□□□ 1.28
CLNS1AP54105 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLNS1AP54105 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
CLNS1AP54105 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLNS1AP54105 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLNS1AP54105 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CLNS1AP54105 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CLNS1AP54105 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLNS1AP54105 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.04■■□□□ 1.28
CLNS1AP54105 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.04■■□□□ 1.28
CLNS1AP54105 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
CLNS1AP54105 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLNS1AP54105 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CLNS1AP54105 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLNS1AP54105 AC097639.1-201ENST00000565519 1891 ntBASIC23.03■■□□□ 1.28
CLNS1AP54105 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLNS1AP54105 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLNS1AP54105 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.03■■□□□ 1.28
CLNS1AP54105 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
CLNS1AP54105 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLNS1AP54105 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLNS1AP54105 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLNS1AP54105 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.02■■□□□ 1.28
CLNS1AP54105 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLNS1AP54105 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLNS1AP54105 AC096887.2-201ENST00000623443 1957 ntBASIC23.02■■□□□ 1.28
CLNS1AP54105 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
CLNS1AP54105 AC126177.7-201ENST00000547904 679 ntBASIC23.02■■□□□ 1.28
CLNS1AP54105 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CLNS1AP54105 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CLNS1AP54105 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.02■■□□□ 1.28
CLNS1AP54105 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.27
CLNS1AP54105 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.01■■□□□ 1.27
CLNS1AP54105 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.01■■□□□ 1.27
CLNS1AP54105 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CLNS1AP54105 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLNS1AP54105 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLNS1AP54105 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CLNS1AP54105 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLNS1AP54105 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLNS1AP54105 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CLNS1AP54105 AC022211.4-201ENST00000625094 2161 ntBASIC23■■□□□ 1.27
CLNS1AP54105 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CLNS1AP54105 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23■■□□□ 1.27
CLNS1AP54105 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLNS1AP54105 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23■■□□□ 1.27
CLNS1AP54105 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLNS1AP54105 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLNS1AP54105 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.99■■□□□ 1.27
CLNS1AP54105 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLNS1AP54105 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLNS1AP54105 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms