Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 ICL1YER065C 1674 nt5.78□□□□□ -1.48
UPF3P48412 ACC1YNR016C 6702 nt5.77□□□□□ -1.49
UPF3P48412 YDR015CYDR015C 240 nt5.77□□□□□ -1.49
UPF3P48412 PDE1YGL248W 1110 nt5.77□□□□□ -1.49
UPF3P48412 ZRT2YLR130C 1269 nt5.77□□□□□ -1.49
UPF3P48412 YLR157W-EYLR157W-E 165 nt5.77□□□□□ -1.49
UPF3P48412 QRI5YLR204W 336 nt5.77□□□□□ -1.49
UPF3P48412 SNN1YNL086W 309 nt5.77□□□□□ -1.49
UPF3P48412 CTS2YDR371W 1536 nt5.77□□□□□ -1.49
UPF3P48412 RAD3YER171W 2337 nt5.76□□□□□ -1.49
UPF3P48412 MUM3YOR298W 1440 nt5.76□□□□□ -1.49
UPF3P48412 SCT1YBL011W 2280 nt5.76□□□□□ -1.49
UPF3P48412 YDR541CYDR541C 1035 nt5.76□□□□□ -1.49
UPF3P48412 PCL6YER059W 1263 nt5.76□□□□□ -1.49
UPF3P48412 YHR213W-AYHR213W-A 234 nt5.76□□□□□ -1.49
UPF3P48412 RPL10YLR075W 666 nt5.76□□□□□ -1.49
UPF3P48412 JNM1YMR294W 1122 nt5.76□□□□□ -1.49
UPF3P48412 CAF40YNL288W 1122 nt5.76□□□□□ -1.49
UPF3P48412 YPL014WYPL014W 1146 nt5.76□□□□□ -1.49
UPF3P48412 GCR2YNL199C 1605 nt5.76□□□□□ -1.49
UPF3P48412 YFL042CYFL042C 2025 nt5.75□□□□□ -1.49
UPF3P48412 GAT1YFL021W 1533 nt5.75□□□□□ -1.49
UPF3P48412 YDL218WYDL218W 954 nt5.75□□□□□ -1.49
UPF3P48412 TAL1YLR354C 1008 nt5.75□□□□□ -1.49
UPF3P48412 GTR1YML121W 933 nt5.75□□□□□ -1.49
UPF3P48412 YOR292CYOR292C 930 nt5.75□□□□□ -1.49
UPF3P48412 CWC27YPL064C 906 nt5.75□□□□□ -1.49
UPF3P48412 ARB1YER036C 1833 nt5.75□□□□□ -1.49
UPF3P48412 YPK2YMR104C 2034 nt5.75□□□□□ -1.49
UPF3P48412 ATG4YNL223W 1485 nt5.75□□□□□ -1.49
UPF3P48412 SDA1YGR245C 2304 nt5.75□□□□□ -1.49
UPF3P48412 RNR3YIL066C 2610 nt5.74□□□□□ -1.49
UPF3P48412 TIM22YDL217C 624 nt5.74□□□□□ -1.49
UPF3P48412 HAP2YGL237C 798 nt5.74□□□□□ -1.49
UPF3P48412 GIP1YBR045C 1920 nt5.74□□□□□ -1.49
UPF3P48412 HAS1YMR290C 1518 nt5.74□□□□□ -1.49
UPF3P48412 CLD1YGR110W 1338 nt5.74□□□□□ -1.49
UPF3P48412 SKI6YGR195W 741 nt5.73□□□□□ -1.49
UPF3P48412 SRN2YLR119W 642 nt5.73□□□□□ -1.49
UPF3P48412 HAP3YBL021C 435 nt5.73□□□□□ -1.49
UPF3P48412 MRC1YCL061C 3291 nt5.73□□□□□ -1.49
UPF3P48412 MCM3YEL032W 2916 nt5.72□□□□□ -1.49
UPF3P48412 NOT3YIL038C 2511 nt5.72□□□□□ -1.49
UPF3P48412 ERC1YHR032W 1746 nt5.72□□□□□ -1.49
UPF3P48412 URA3YEL021W 804 nt5.72□□□□□ -1.49
UPF3P48412 RPL12AYEL054C 498 nt5.72□□□□□ -1.49
UPF3P48412 RME1YGR044C 903 nt5.72□□□□□ -1.49
UPF3P48412 SPG1YGR236C 288 nt5.72□□□□□ -1.49
UPF3P48412 CTR2YHR175W 570 nt5.72□□□□□ -1.49
UPF3P48412 YJU3YKL094W 942 nt5.72□□□□□ -1.49
UPF3P48412 GEP5YLR091W 882 nt5.72□□□□□ -1.49
UPF3P48412 NHP6BYBR089C-A 300 nt5.72□□□□□ -1.49
UPF3P48412 VAN1YML115C 1608 nt5.72□□□□□ -1.49
UPF3P48412 CLB1YGR108W 1416 nt5.72□□□□□ -1.49
UPF3P48412 ABZ1YNR033W 2364 nt5.72□□□□□ -1.49
UPF3P48412 VMA13YPR036W 1437 nt5.72□□□□□ -1.49
UPF3P48412 GPB2YAL056W 2643 nt5.72□□□□□ -1.49
UPF3P48412 RAD24YER173W 1980 nt5.71□□□□□ -1.49
UPF3P48412 GIP2YER054C 1647 nt5.71□□□□□ -1.5
UPF3P48412 HIR1YBL008W 2523 nt5.71□□□□□ -1.5
UPF3P48412 DOT5YIL010W 648 nt5.71□□□□□ -1.5
UPF3P48412 RHO4YKR055W 876 nt5.71□□□□□ -1.5
UPF3P48412 RPC19YNL113W 429 nt5.71□□□□□ -1.5
UPF3P48412 LYS21YDL131W 1323 nt5.71□□□□□ -1.5
UPF3P48412 DBF2YGR092W 1719 nt5.71□□□□□ -1.5
UPF3P48412 HSP78YDR258C 2436 nt5.7□□□□□ -1.5
UPF3P48412 ALT1YLR089C 1779 nt5.7□□□□□ -1.5
UPF3P48412 PYC1YGL062W 3537 nt5.7□□□□□ -1.5
UPF3P48412 UBC6YER100W 753 nt5.7□□□□□ -1.5
UPF3P48412 MOG1YJR074W 657 nt5.7□□□□□ -1.5
UPF3P48412 RPS5YJR123W 678 nt5.7□□□□□ -1.5
UPF3P48412 KEX2YNL238W 2445 nt5.7□□□□□ -1.5
UPF3P48412 HSP104YLL026W 2727 nt5.7□□□□□ -1.5
UPF3P48412 DXO1YDR370C 1329 nt5.7□□□□□ -1.5
UPF3P48412 FLC3YGL139W 2409 nt5.69□□□□□ -1.5
UPF3P48412 KEL1YHR158C 3495 nt5.69□□□□□ -1.5
UPF3P48412 YDL129WYDL129W 876 nt5.69□□□□□ -1.5
UPF3P48412 RSM10YDR041W 612 nt5.69□□□□□ -1.5
UPF3P48412 YER148W-AYER148W-A 579 nt5.69□□□□□ -1.5
UPF3P48412 SUP19tS(UGA)E 82 nt5.69□□□□□ -1.5
UPF3P48412 SUP17tS(UGA)I 82 nt5.69□□□□□ -1.5
UPF3P48412 SUP16tS(UGA)P 82 nt5.69□□□□□ -1.5
UPF3P48412 YOL131WYOL131W 327 nt5.69□□□□□ -1.5
UPF3P48412 YRF1-4YLR466W 4149 nt5.68□□□□□ -1.5
UPF3P48412 SPO77YLR341W 1434 nt5.68□□□□□ -1.5
UPF3P48412 RPS2YGL123W 765 nt5.68□□□□□ -1.5
UPF3P48412 LEU5YHR002W 1074 nt5.68□□□□□ -1.5
UPF3P48412 PIF1YML061C 2580 nt5.68□□□□□ -1.5
UPF3P48412 SFB3YHR098C 2790 nt5.67□□□□□ -1.5
UPF3P48412 YTA12YMR089C 2478 nt5.67□□□□□ -1.5
UPF3P48412 PHB1YGR132C 864 nt5.67□□□□□ -1.5
UPF3P48412 BUD32YGR262C 786 nt5.67□□□□□ -1.5
UPF3P48412 PRE3YJL001W 648 nt5.67□□□□□ -1.5
UPF3P48412 YNL042W-BYNL042W-B 258 nt5.67□□□□□ -1.5
UPF3P48412 CBP1YJL209W 1965 nt5.67□□□□□ -1.5
UPF3P48412 YMD8YML038C 1329 nt5.67□□□□□ -1.5
UPF3P48412 GUA1YMR217W 1578 nt5.67□□□□□ -1.5
UPF3P48412 MTC5YDR128W 3447 nt5.67□□□□□ -1.5
UPF3P48412 DUR1,2YBR208C 5508 nt5.67□□□□□ -1.5
UPF3P48412 ATP1YBL099W 1638 nt5.66□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 84 ms