Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3AP46098 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3AP46098 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTR3AP46098 CLDN5-201ENST00000403084 2357 ntBASIC21.54■■□□□ 1.04
HTR3AP46098 KRT18P60-201ENST00000312876 1297 ntBASIC21.54■■□□□ 1.04
HTR3AP46098 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3AP46098 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.54■■□□□ 1.04
HTR3AP46098 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3AP46098 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTR3AP46098 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3AP46098 AC079834.2-201ENST00000609776 1949 ntBASIC21.53■■□□□ 1.04
HTR3AP46098 DUX4L9-201ENST00000449051 1259 ntBASIC21.53■■□□□ 1.04
HTR3AP46098 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.53■■□□□ 1.04
HTR3AP46098 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTR3AP46098 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3AP46098 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3AP46098 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3AP46098 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.52■■□□□ 1.04
HTR3AP46098 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
HTR3AP46098 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3AP46098 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3AP46098 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTR3AP46098 SPCS2P3-201ENST00000500401 656 ntBASIC21.52■■□□□ 1.04
HTR3AP46098 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.52■■□□□ 1.04
HTR3AP46098 AC129492.7-201ENST00000622992 756 ntBASIC21.52■■□□□ 1.04
HTR3AP46098 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3AP46098 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.51■■□□□ 1.03
HTR3AP46098 RPS2P7-201ENST00000447334 885 ntBASIC21.51■■□□□ 1.03
HTR3AP46098 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.51■■□□□ 1.03
HTR3AP46098 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3AP46098 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3AP46098 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.51■■□□□ 1.03
HTR3AP46098 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3AP46098 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3AP46098 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTR3AP46098 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3AP46098 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3AP46098 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
HTR3AP46098 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3AP46098 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.5■■□□□ 1.03
HTR3AP46098 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3AP46098 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HTR3AP46098 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3AP46098 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.5■■□□□ 1.03
HTR3AP46098 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HTR3AP46098 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
HTR3AP46098 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HTR3AP46098 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3AP46098 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HTR3AP46098 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3AP46098 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3AP46098 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3AP46098 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HTR3AP46098 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR3AP46098 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HTR3AP46098 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HTR3AP46098 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HTR3AP46098 AC142381.3-201ENST00000568208 1670 ntBASIC21.48■■□□□ 1.03
HTR3AP46098 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.48■■□□□ 1.03
HTR3AP46098 AC087393.1-201ENST00000582896 145 ntBASIC21.48■■□□□ 1.03
HTR3AP46098 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.48■■□□□ 1.03
HTR3AP46098 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HTR3AP46098 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3AP46098 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3AP46098 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HTR3AP46098 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HTR3AP46098 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.47■■□□□ 1.03
HTR3AP46098 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3AP46098 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.47■■□□□ 1.03
HTR3AP46098 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HTR3AP46098 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3AP46098 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HTR3AP46098 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.46■■□□□ 1.03
HTR3AP46098 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 SLC6A10P-202ENST00000431994 2058 ntBASIC21.46■■□□□ 1.03
HTR3AP46098 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 AC022211.4-201ENST00000625094 2161 ntBASIC21.46■■□□□ 1.03
HTR3AP46098 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HTR3AP46098 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTR3AP46098 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.45■■□□□ 1.02
HTR3AP46098 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HTR3AP46098 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
HTR3AP46098 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTR3AP46098 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HTR3AP46098 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTR3AP46098 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTR3AP46098 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTR3AP46098 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HTR3AP46098 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
HTR3AP46098 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTR3AP46098 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HTR3AP46098 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms