Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.05■□□□□ 0.64
SAA4P35542 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SAA4P35542 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SAA4P35542 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SAA4P35542 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.05■□□□□ 0.64
SAA4P35542 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA4P35542 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.04■□□□□ 0.64
SAA4P35542 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.04■□□□□ 0.64
SAA4P35542 AC137630.3-201ENST00000607245 391 ntBASIC19.04■□□□□ 0.64
SAA4P35542 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA4P35542 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SAA4P35542 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA4P35542 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SAA4P35542 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SAA4P35542 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.03■□□□□ 0.64
SAA4P35542 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SAA4P35542 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SAA4P35542 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SAA4P35542 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.03■□□□□ 0.64
SAA4P35542 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.03■□□□□ 0.64
SAA4P35542 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.03■□□□□ 0.64
SAA4P35542 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.03■□□□□ 0.64
SAA4P35542 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.03■□□□□ 0.64
SAA4P35542 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.02■□□□□ 0.64
SAA4P35542 AC090877.2-201ENST00000558441 1738 ntBASIC19.02■□□□□ 0.63
SAA4P35542 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SAA4P35542 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.01■□□□□ 0.63
SAA4P35542 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
SAA4P35542 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.01■□□□□ 0.63
SAA4P35542 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.01■□□□□ 0.63
SAA4P35542 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.01■□□□□ 0.63
SAA4P35542 MIR4787-201ENST00000607364 84 ntBASIC19.01■□□□□ 0.63
SAA4P35542 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.01■□□□□ 0.63
SAA4P35542 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAA4P35542 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SAA4P35542 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA4P35542 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA4P35542 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19■□□□□ 0.63
SAA4P35542 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19■□□□□ 0.63
SAA4P35542 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA4P35542 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAA4P35542 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA4P35542 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA4P35542 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA4P35542 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAA4P35542 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.98■□□□□ 0.63
SAA4P35542 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAA4P35542 AC021242.3-201ENST00000607598 1377 ntBASIC18.98■□□□□ 0.63
SAA4P35542 SLC6A10P-202ENST00000431994 2058 ntBASIC18.98■□□□□ 0.63
SAA4P35542 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.98■□□□□ 0.63
SAA4P35542 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.98■□□□□ 0.63
SAA4P35542 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SAA4P35542 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SAA4P35542 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SAA4P35542 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.97■□□□□ 0.63
SAA4P35542 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.97■□□□□ 0.63
SAA4P35542 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SAA4P35542 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SAA4P35542 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA4P35542 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SAA4P35542 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA4P35542 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.96■□□□□ 0.63
SAA4P35542 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA4P35542 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA4P35542 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SAA4P35542 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA4P35542 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.96■□□□□ 0.63
SAA4P35542 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SAA4P35542 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA4P35542 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.95■□□□□ 0.62
SAA4P35542 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.95■□□□□ 0.62
SAA4P35542 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA4P35542 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.95■□□□□ 0.62
SAA4P35542 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SAA4P35542 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA4P35542 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
SAA4P35542 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA4P35542 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.94■□□□□ 0.62
SAA4P35542 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA4P35542 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.94■□□□□ 0.62
SAA4P35542 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.94■□□□□ 0.62
SAA4P35542 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA4P35542 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
SAA4P35542 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA4P35542 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SAA4P35542 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.93■□□□□ 0.62
SAA4P35542 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.93■□□□□ 0.62
SAA4P35542 TSPY9P-201ENST00000440215 945 ntBASIC18.93■□□□□ 0.62
SAA4P35542 TSPY11P-201ENST00000442607 1045 ntBASIC18.93■□□□□ 0.62
SAA4P35542 AL356441.2-201ENST00000443009 864 ntBASIC18.93■□□□□ 0.62
SAA4P35542 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SAA4P35542 AF131216.4-201ENST00000638924 1588 ntBASIC18.93■□□□□ 0.62
SAA4P35542 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms