Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
H2AFXP16104 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
H2AFXP16104 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.57■■□□□ 1.52
H2AFXP16104 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.57■■□□□ 1.52
H2AFXP16104 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
H2AFXP16104 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
H2AFXP16104 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
H2AFXP16104 AC127496.7-201ENST00000625110 1798 ntBASIC24.57■■□□□ 1.52
H2AFXP16104 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
H2AFXP16104 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.56■■□□□ 1.52
H2AFXP16104 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.56■■□□□ 1.52
H2AFXP16104 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
H2AFXP16104 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
H2AFXP16104 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.55■■□□□ 1.52
H2AFXP16104 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.55■■□□□ 1.52
H2AFXP16104 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
H2AFXP16104 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.55■■□□□ 1.52
H2AFXP16104 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.55■■□□□ 1.52
H2AFXP16104 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
H2AFXP16104 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.55■■□□□ 1.52
H2AFXP16104 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
H2AFXP16104 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.54■■□□□ 1.52
H2AFXP16104 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.54■■□□□ 1.52
H2AFXP16104 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
H2AFXP16104 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.54■■□□□ 1.52
H2AFXP16104 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
H2AFXP16104 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
H2AFXP16104 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
H2AFXP16104 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.54■■□□□ 1.52
H2AFXP16104 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
H2AFXP16104 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
H2AFXP16104 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
H2AFXP16104 SETD8P1-201ENST00000623146 1180 ntBASIC24.53■■□□□ 1.52
H2AFXP16104 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
H2AFXP16104 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
H2AFXP16104 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
H2AFXP16104 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.52■■□□□ 1.52
H2AFXP16104 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.52■■□□□ 1.52
H2AFXP16104 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.52■■□□□ 1.52
H2AFXP16104 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
H2AFXP16104 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
H2AFXP16104 CAHM-201ENST00000604200 896 ntBASIC24.52■■□□□ 1.52
H2AFXP16104 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
H2AFXP16104 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
H2AFXP16104 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
H2AFXP16104 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.52■■□□□ 1.52
H2AFXP16104 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
H2AFXP16104 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
H2AFXP16104 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
H2AFXP16104 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
H2AFXP16104 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.51■■□□□ 1.51
H2AFXP16104 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
H2AFXP16104 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
H2AFXP16104 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
H2AFXP16104 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
H2AFXP16104 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
H2AFXP16104 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.5■■□□□ 1.51
H2AFXP16104 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.5■■□□□ 1.51
H2AFXP16104 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.5■■□□□ 1.51
H2AFXP16104 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.5■■□□□ 1.51
H2AFXP16104 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
H2AFXP16104 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
H2AFXP16104 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.5■■□□□ 1.51
H2AFXP16104 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.49■■□□□ 1.51
H2AFXP16104 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
H2AFXP16104 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.49■■□□□ 1.51
H2AFXP16104 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
H2AFXP16104 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
H2AFXP16104 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.49■■□□□ 1.51
H2AFXP16104 MIR6090-201ENST00000622481 60 ntBASIC24.49■■□□□ 1.51
H2AFXP16104 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
H2AFXP16104 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.49■■□□□ 1.51
H2AFXP16104 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
H2AFXP16104 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.49■■□□□ 1.51
H2AFXP16104 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.49■■□□□ 1.51
H2AFXP16104 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
H2AFXP16104 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
H2AFXP16104 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
H2AFXP16104 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
H2AFXP16104 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
H2AFXP16104 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.47■■□□□ 1.51
H2AFXP16104 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
H2AFXP16104 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
H2AFXP16104 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.47■■□□□ 1.51
H2AFXP16104 AC108673.1-201ENST00000510422 1159 ntBASIC24.47■■□□□ 1.51
H2AFXP16104 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
H2AFXP16104 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
H2AFXP16104 GUSBP5-202ENST00000510805 1989 ntBASIC24.47■■□□□ 1.51
H2AFXP16104 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
H2AFXP16104 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.46■■□□□ 1.51
H2AFXP16104 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.46■■□□□ 1.51
H2AFXP16104 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
H2AFXP16104 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.46■■□□□ 1.51
H2AFXP16104 SLC25A24-204ENST00000569674 2357 ntBASIC24.46■■□□□ 1.51
H2AFXP16104 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
H2AFXP16104 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
H2AFXP16104 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
H2AFXP16104 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
H2AFXP16104 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
H2AFXP16104 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms