Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 SEC18YBR080C 2277 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 CDC3YLR314C 1563 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 MHR1YDR296W 681 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 RPN9YDR427W 1182 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 YHL030W-AYHL030W-A 462 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 YKL071WYKL071W 771 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 MAC1YMR021C 1254 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 RTC2YBR147W 891 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 BDF2YDL070W 1917 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 GUP2YPL189W 1830 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 UGO1YDR470C 1509 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 UBP8YMR223W 1416 nt6.24□□□□□ -1.41
TY1A-ER1P0CX71 AVT4YNL101W 2142 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 FPR2YDR519W 408 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 BTN2YGR142W 1233 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 IPI1YHR085W 1005 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 NAS2YIL007C 663 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 SFH5YJL145W 885 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 TVP38YKR088C 1014 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 CAR2YLR438W 1275 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 DEG1YFL001W 1329 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 VHS2YIL135C 1311 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 SMC5YOL034W 3282 nt6.23□□□□□ -1.41
TY1A-ER1P0CX71 YFR006WYFR006W 1608 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 YDL124WYDL124W 939 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 NUP42YDR192C 1293 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 DSD1YGL196W 1287 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 YHR095WYHR095W 495 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 YIL168WYIL168W 384 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 SMD2YLR275W 333 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 RPS10BYMR230W 318 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 AIF1YNR074C 1137 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 STE12YHR084W 2067 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 URA7YBL039C 1740 nt6.22□□□□□ -1.41
TY1A-ER1P0CX71 PPH21YDL134C 1110 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 YIL102C-AYIL102C-A 228 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 MOB1YIL106W 945 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 PER33YLR064W 822 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 NBP1YLR457C 960 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 SPS4YOR313C 1017 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 RBD2YPL246C 789 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 CNS1YBR155W 1158 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 snR37snR37 386 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 UTR2YEL040W 1404 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 GSH2YOL049W 1476 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 CCT3YJL014W 1605 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 FAA4YMR246W 2085 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 YBR284WYBR284W 2394 nt6.21□□□□□ -1.42
TY1A-ER1P0CX71 KNS1YLL019C 2214 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 YCR024C-BYCR024C-B 267 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 BUD30YDL151C 582 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 YDR278CYDR278C 318 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 CAB1YDR531W 1104 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 NIF3YGL221C 867 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 YKL123WYKL123W 381 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 MIA40YKL195W 1212 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 YML131WYML131W 1098 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 FYV6YNL133C 522 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 RPB8YOR224C 441 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 YPL073CYPL073C 486 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 MRPL37YBR268W 318 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 LCB2YDR062W 1686 nt6.2□□□□□ -1.42
TY1A-ER1P0CX71 RPT1YKL145W 1404 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 PUP3YER094C 618 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 HSP12YFL014W 330 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 TIM21YGR033C 720 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 YHR033WYHR033W 1272 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 HOT13YKL084W 351 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 YBL068W-AYBL068W-A 237 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 SME1YOR159C 285 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 SCO1YBR037C 888 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 FUM1YPL262W 1467 nt6.19□□□□□ -1.42
TY1A-ER1P0CX71 DBP9YLR276C 1785 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 TUB4YLR212C 1422 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 GAS2YLR343W 1668 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 MCH1YDL054C 1461 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 CHO1YER026C 831 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 VMA16YHR026W 642 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 CTF8YHR191C 402 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 RPL2BYIL018W 765 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 IST3YIR005W 447 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 CDD1YLR245C 429 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 EAF7YNL136W 1278 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 TGS1YPL157W 948 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 RHO1YPR165W 630 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 RPO26YPR187W 468 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YDR098C-AYDR098C-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YDR210C-CYDR210C-C 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YDR261C-CYDR261C-C 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YDR316W-AYDR316W-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YDR365W-AYDR365W-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YER137C-AYER137C-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YER159C-AYER159C-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YGR027W-AYGR027W-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YGR038C-AYGR038C-A 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YGR161C-CYGR161C-C 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YJR026WYJR026W 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YJR028WYJR028W 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YAR010CYAR010C 1323 nt6.18□□□□□ -1.42
TY1A-ER1P0CX71 YLR157C-AYLR157C-A 1323 nt6.18□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 113.5 ms