Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 AC019171.1-201ENST00000601251 1056 ntBASIC20.35■□□□□ 0.85
NGFP01138 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NGFP01138 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NGFP01138 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NGFP01138 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NGFP01138 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.34■□□□□ 0.85
NGFP01138 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.34■□□□□ 0.85
NGFP01138 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NGFP01138 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.34■□□□□ 0.85
NGFP01138 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NGFP01138 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.33■□□□□ 0.85
NGFP01138 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NGFP01138 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.33■□□□□ 0.85
NGFP01138 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NGFP01138 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
NGFP01138 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NGFP01138 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.32■□□□□ 0.84
NGFP01138 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NGFP01138 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.32■□□□□ 0.84
NGFP01138 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NGFP01138 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.32■□□□□ 0.84
NGFP01138 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NGFP01138 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NGFP01138 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NGFP01138 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.31■□□□□ 0.84
NGFP01138 AL592295.1-201ENST00000400984 884 ntBASIC20.31■□□□□ 0.84
NGFP01138 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.31■□□□□ 0.84
NGFP01138 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NGFP01138 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NGFP01138 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NGFP01138 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NGFP01138 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NGFP01138 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.3■□□□□ 0.84
NGFP01138 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
NGFP01138 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.3■□□□□ 0.84
NGFP01138 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NGFP01138 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NGFP01138 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NGFP01138 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NGFP01138 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NGFP01138 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NGFP01138 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NGFP01138 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NGFP01138 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.29■□□□□ 0.84
NGFP01138 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.28■□□□□ 0.84
NGFP01138 KRT8P33-201ENST00000508125 1423 ntBASIC20.27■□□□□ 0.84
NGFP01138 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NGFP01138 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NGFP01138 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NGFP01138 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.27■□□□□ 0.84
NGFP01138 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NGFP01138 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NGFP01138 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NGFP01138 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.27■□□□□ 0.84
NGFP01138 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NGFP01138 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.27■□□□□ 0.84
NGFP01138 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.27■□□□□ 0.84
NGFP01138 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NGFP01138 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.27■□□□□ 0.84
NGFP01138 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
NGFP01138 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NGFP01138 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.26■□□□□ 0.83
NGFP01138 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NGFP01138 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NGFP01138 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NGFP01138 AC103834.1-201ENST00000520383 144 ntBASIC20.26■□□□□ 0.83
NGFP01138 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NGFP01138 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.26■□□□□ 0.83
NGFP01138 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NGFP01138 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
NGFP01138 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.25■□□□□ 0.83
NGFP01138 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.25■□□□□ 0.83
NGFP01138 MIR6089-201ENST00000616698 64 ntBASIC20.25■□□□□ 0.83
NGFP01138 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NGFP01138 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NGFP01138 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NGFP01138 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NGFP01138 AC022616.5-201ENST00000518796 181 ntBASIC20.24■□□□□ 0.83
NGFP01138 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.24■□□□□ 0.83
NGFP01138 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.24■□□□□ 0.83
NGFP01138 AP003733.4-201ENST00000623785 1697 ntBASIC20.23■□□□□ 0.83
NGFP01138 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGFP01138 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms