Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPDEFO95238 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.73■□□□□ 0.75
SPDEFO95238 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPDEFO95238 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPDEFO95238 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.73■□□□□ 0.75
SPDEFO95238 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPDEFO95238 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPDEFO95238 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPDEFO95238 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPDEFO95238 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPDEFO95238 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPDEFO95238 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPDEFO95238 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.71■□□□□ 0.75
SPDEFO95238 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.71■□□□□ 0.75
SPDEFO95238 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SPDEFO95238 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SPDEFO95238 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPDEFO95238 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPDEFO95238 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.7■□□□□ 0.74
SPDEFO95238 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SPDEFO95238 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 MIR639-201ENST00000384974 98 ntBASIC19.7■□□□□ 0.74
SPDEFO95238 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.7■□□□□ 0.74
SPDEFO95238 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPDEFO95238 AL359258.2-201ENST00000564063 1566 ntBASIC19.7■□□□□ 0.74
SPDEFO95238 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SPDEFO95238 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
SPDEFO95238 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPDEFO95238 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPDEFO95238 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPDEFO95238 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.69■□□□□ 0.74
SPDEFO95238 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPDEFO95238 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPDEFO95238 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPDEFO95238 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.69■□□□□ 0.74
SPDEFO95238 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 AC096887.2-201ENST00000623443 1957 ntBASIC19.68■□□□□ 0.74
SPDEFO95238 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SPDEFO95238 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.68■□□□□ 0.74
SPDEFO95238 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.68■□□□□ 0.74
SPDEFO95238 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.68■□□□□ 0.74
SPDEFO95238 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 PKD1P6-201ENST00000343738 4769 ntBASIC19.68■□□□□ 0.74
SPDEFO95238 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPDEFO95238 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.68■□□□□ 0.74
SPDEFO95238 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.68■□□□□ 0.74
SPDEFO95238 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.67■□□□□ 0.74
SPDEFO95238 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPDEFO95238 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPDEFO95238 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SPDEFO95238 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPDEFO95238 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPDEFO95238 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPDEFO95238 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SPDEFO95238 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SPDEFO95238 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPDEFO95238 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SPDEFO95238 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.66■□□□□ 0.74
SPDEFO95238 C9orf163-202ENST00000624034 2573 ntBASIC19.66■□□□□ 0.74
SPDEFO95238 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPDEFO95238 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SPDEFO95238 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SPDEFO95238 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPDEFO95238 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
SPDEFO95238 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.65■□□□□ 0.74
SPDEFO95238 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPDEFO95238 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.64■□□□□ 0.74
SPDEFO95238 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPDEFO95238 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SPDEFO95238 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPDEFO95238 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPDEFO95238 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPDEFO95238 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPDEFO95238 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SPDEFO95238 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms