Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CHL1O00533 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CHL1O00533 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHL1O00533 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHL1O00533 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
CHL1O00533 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.48■■■□□ 2.47
CHL1O00533 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.48■■■□□ 2.47
CHL1O00533 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHL1O00533 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHL1O00533 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHL1O00533 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHL1O00533 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
CHL1O00533 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHL1O00533 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.46■■■□□ 2.47
CHL1O00533 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHL1O00533 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHL1O00533 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.46■■■□□ 2.47
CHL1O00533 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHL1O00533 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.46■■■□□ 2.47
CHL1O00533 AC021242.3-201ENST00000607598 1377 ntBASIC30.45■■■□□ 2.47
CHL1O00533 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CHL1O00533 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CHL1O00533 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.45■■■□□ 2.47
CHL1O00533 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.45■■■□□ 2.46
CHL1O00533 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CHL1O00533 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
CHL1O00533 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.43■■■□□ 2.46
CHL1O00533 AF131216.4-201ENST00000638924 1588 ntBASIC30.43■■■□□ 2.46
CHL1O00533 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHL1O00533 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHL1O00533 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHL1O00533 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CHL1O00533 BX664725.1-201ENST00000438252 379 ntBASIC30.42■■■□□ 2.46
CHL1O00533 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.42■■■□□ 2.46
CHL1O00533 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CHL1O00533 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.41■■■□□ 2.46
CHL1O00533 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.41■■■□□ 2.46
CHL1O00533 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHL1O00533 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
CHL1O00533 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHL1O00533 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHL1O00533 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
CHL1O00533 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CHL1O00533 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
CHL1O00533 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHL1O00533 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.4■■■□□ 2.46
CHL1O00533 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHL1O00533 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHL1O00533 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHL1O00533 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHL1O00533 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
CHL1O00533 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.39■■■□□ 2.45
CHL1O00533 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHL1O00533 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.38■■■□□ 2.45
CHL1O00533 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.38■■■□□ 2.45
CHL1O00533 MIR4787-201ENST00000607364 84 ntBASIC30.38■■■□□ 2.45
CHL1O00533 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHL1O00533 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.37■■■□□ 2.45
CHL1O00533 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.37■■■□□ 2.45
CHL1O00533 MIR6089-201ENST00000616698 64 ntBASIC30.37■■■□□ 2.45
CHL1O00533 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHL1O00533 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHL1O00533 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHL1O00533 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
CHL1O00533 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHL1O00533 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHL1O00533 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.36■■■□□ 2.45
CHL1O00533 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.36■■■□□ 2.45
CHL1O00533 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHL1O00533 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.35■■■□□ 2.45
CHL1O00533 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.35■■■□□ 2.45
CHL1O00533 KRT125P-201ENST00000546827 989 ntBASIC30.35■■■□□ 2.45
CHL1O00533 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHL1O00533 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHL1O00533 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHL1O00533 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHL1O00533 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHL1O00533 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.34■■■□□ 2.45
CHL1O00533 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.34■■■□□ 2.45
CHL1O00533 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.34■■■□□ 2.45
CHL1O00533 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
CHL1O00533 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHL1O00533 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
CHL1O00533 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHL1O00533 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.33■■■□□ 2.45
CHL1O00533 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHL1O00533 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHL1O00533 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHL1O00533 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHL1O00533 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CHL1O00533 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
CHL1O00533 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.32■■■□□ 2.44
CHL1O00533 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.32■■■□□ 2.44
CHL1O00533 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms