Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF103-CHMP3A0A140T963 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF103-CHMP3A0A140T963 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF103-CHMP3A0A140T963 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RNF103-CHMP3A0A140T963 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF103-CHMP3A0A140T963 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
RNF103-CHMP3A0A140T963 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF103-CHMP3A0A140T963 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF103-CHMP3A0A140T963 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RNF103-CHMP3A0A140T963 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF103-CHMP3A0A140T963 AC068473.5-201ENST00000616428 2072 ntBASIC22.42■■□□□ 1.18
RNF103-CHMP3A0A140T963 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF103-CHMP3A0A140T963 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF103-CHMP3A0A140T963 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF103-CHMP3A0A140T963 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RNF103-CHMP3A0A140T963 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RNF103-CHMP3A0A140T963 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RNF103-CHMP3A0A140T963 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RNF103-CHMP3A0A140T963 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.18
RNF103-CHMP3A0A140T963 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.39■■□□□ 1.17
RNF103-CHMP3A0A140T963 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 RP9P-202ENST00000450133 1212 ntBASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 MIR4449-201ENST00000578365 66 ntBASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF103-CHMP3A0A140T963 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF103-CHMP3A0A140T963 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 AC093536.1-201ENST00000569153 554 ntBASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 AP003733.4-201ENST00000623785 1697 ntBASIC22.36■■□□□ 1.17
RNF103-CHMP3A0A140T963 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF103-CHMP3A0A140T963 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 AC007029.1-201ENST00000604183 313 ntBASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 SLC6A10P-202ENST00000431994 2058 ntBASIC22.34■■□□□ 1.17
RNF103-CHMP3A0A140T963 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
RNF103-CHMP3A0A140T963 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF103-CHMP3A0A140T963 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF103-CHMP3A0A140T963 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF103-CHMP3A0A140T963 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
RNF103-CHMP3A0A140T963 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF103-CHMP3A0A140T963 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF103-CHMP3A0A140T963 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms