Protein–RNA interactions for Protein: Q03433

VPS71, Vacuolar protein sorting-associated protein 71, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS71Q03433 INM2YDR287W 879 nt9.69□□□□□ -0.86
VPS71Q03433 SDH1YKL148C 1923 nt9.69□□□□□ -0.86
VPS71Q03433 PCH2YBR186W 1695 nt9.68□□□□□ -0.86
VPS71Q03433 YDL221WYDL221W 552 nt9.66□□□□□ -0.86
VPS71Q03433 WHI5YOR083W 888 nt9.66□□□□□ -0.86
VPS71Q03433 GUT2YIL155C 1950 nt9.65□□□□□ -0.86
VPS71Q03433 YDR095CYDR095C 411 nt9.65□□□□□ -0.86
VPS71Q03433 MOT3YMR070W 1473 nt9.65□□□□□ -0.87
VPS71Q03433 SEC11YIR022W 504 nt9.62□□□□□ -0.87
VPS71Q03433 YBL100CYBL100C 315 nt9.6□□□□□ -0.87
VPS71Q03433 CAC2YML102W 1407 nt9.56□□□□□ -0.88
VPS71Q03433 TRM9YML014W 840 nt9.55□□□□□ -0.88
VPS71Q03433 SCC4YER147C 1875 nt9.52□□□□□ -0.89
VPS71Q03433 PTP1YDL230W 1008 nt9.5□□□□□ -0.89
VPS71Q03433 YPR011CYPR011C 981 nt9.5□□□□□ -0.89
VPS71Q03433 FUN26YAL022C 1554 nt9.5□□□□□ -0.89
VPS71Q03433 FMP45YDL222C 930 nt9.49□□□□□ -0.89
VPS71Q03433 DSK2YMR276W 1122 nt9.48□□□□□ -0.89
VPS71Q03433 RPP2AYOL039W 321 nt9.48□□□□□ -0.89
VPS71Q03433 PIB2YGL023C 1908 nt9.47□□□□□ -0.89
VPS71Q03433 YLR236CYLR236C 324 nt9.44□□□□□ -0.9
VPS71Q03433 IMP2'YIL154C 1041 nt9.43□□□□□ -0.9
VPS71Q03433 YLR154C-GYLR154C-G 150 nt9.43□□□□□ -0.9
VPS71Q03433 CCT6YDR188W 1641 nt9.42□□□□□ -0.9
VPS71Q03433 IRC15YPL017C 1500 nt9.41□□□□□ -0.9
VPS71Q03433 YCH1YGR203W 447 nt9.41□□□□□ -0.9
VPS71Q03433 YSC84YHR016C 1407 nt9.39□□□□□ -0.91
VPS71Q03433 RTF1YGL244W 1677 nt9.38□□□□□ -0.91
VPS71Q03433 MRPL8YJL063C 717 nt9.36□□□□□ -0.91
VPS71Q03433 ALF1YNL148C 765 nt9.36□□□□□ -0.91
VPS71Q03433 GIS3YLR094C 1509 nt9.36□□□□□ -0.91
VPS71Q03433 SUF2tP(AGG)C 72 nt9.31□□□□□ -0.92
VPS71Q03433 SUF10tP(AGG)N 72 nt9.31□□□□□ -0.92
VPS71Q03433 YHL050CYHL050C 2094 nt9.3□□□□□ -0.92
VPS71Q03433 YJL152WYJL152W 360 nt9.29□□□□□ -0.92
VPS71Q03433 LPX1YOR084W 1164 nt9.27□□□□□ -0.93
VPS71Q03433 BOP3YNL042W 1191 nt9.26□□□□□ -0.93
VPS71Q03433 ADO1YJR105W 1023 nt9.24□□□□□ -0.93
VPS71Q03433 ERV46YAL042W 1248 nt9.24□□□□□ -0.93
VPS71Q03433 PTK1YKL198C 1989 nt9.23□□□□□ -0.93
VPS71Q03433 SIS1YNL007C 1059 nt9.23□□□□□ -0.93
VPS71Q03433 SPP1YPL138C 1062 nt9.23□□□□□ -0.93
VPS71Q03433 IDH1YNL037C 1083 nt9.21□□□□□ -0.94
VPS71Q03433 BOR1YNL275W 1731 nt9.2□□□□□ -0.94
VPS71Q03433 YEL076C-AYEL076C-A 651 nt9.2□□□□□ -0.94
VPS71Q03433 YEL076CYEL076C 651 nt9.2□□□□□ -0.94
VPS71Q03433 YLR464WYLR464W 651 nt9.2□□□□□ -0.94
VPS71Q03433 YJL225CYJL225C 5277 nt9.19□□□□□ -0.94
VPS71Q03433 RRT12YCR045C 1476 nt9.19□□□□□ -0.94
VPS71Q03433 UME6YDR207C 2511 nt9.18□□□□□ -0.94
VPS71Q03433 GFD2YCL036W 1701 nt9.18□□□□□ -0.94
VPS71Q03433 YDR433WYDR433W 441 nt9.17□□□□□ -0.94
VPS71Q03433 UBX6YJL048C 1191 nt9.16□□□□□ -0.94
VPS71Q03433 RTG1YOL067C 534 nt9.16□□□□□ -0.94
VPS71Q03433 RTS2YOR077W 699 nt9.16□□□□□ -0.94
VPS71Q03433 YKR040CYKR040C 504 nt9.14□□□□□ -0.95
VPS71Q03433 ART5YGR068C 1761 nt9.14□□□□□ -0.95
VPS71Q03433 TIR4YOR009W 1464 nt9.11□□□□□ -0.95
VPS71Q03433 YNL195CYNL195C 786 nt9.11□□□□□ -0.95
VPS71Q03433 GBP2YCL011C 1284 nt9.1□□□□□ -0.95
VPS71Q03433 CUE1YMR264W 612 nt9.08□□□□□ -0.96
VPS71Q03433 MXR2YCL033C 507 nt9.08□□□□□ -0.96
VPS71Q03433 PET9YBL030C 957 nt9.05□□□□□ -0.96
VPS71Q03433 YFL054CYFL054C 1941 nt9.03□□□□□ -0.96
VPS71Q03433 NCP1YHR042W 2076 nt9.01□□□□□ -0.97
VPS71Q03433 SPT8YLR055C 1809 nt8.99□□□□□ -0.97
VPS71Q03433 HUA1YGR268C 597 nt8.99□□□□□ -0.97
VPS71Q03433 YMR057CYMR057C 372 nt8.99□□□□□ -0.97
VPS71Q03433 Q0182Q0182 405 nt8.98□□□□□ -0.97
VPS71Q03433 YIL100WYIL100W 354 nt8.98□□□□□ -0.97
VPS71Q03433 YCL048W-AYCL048W-A 240 nt8.96□□□□□ -0.98
VPS71Q03433 TCD2YKL027W 1344 nt8.95□□□□□ -0.98
VPS71Q03433 YDR094WYDR094W 336 nt8.94□□□□□ -0.98
VPS71Q03433 MCH5YOR306C 1566 nt8.91□□□□□ -0.98
VPS71Q03433 FRD1YEL047C 1413 nt8.88□□□□□ -0.99
VPS71Q03433 HSP60YLR259C 1719 nt8.88□□□□□ -0.99
VPS71Q03433 DED1YOR204W 1815 nt8.87□□□□□ -0.99
VPS71Q03433 ALG12YNR030W 1656 nt8.85□□□□□ -0.99
VPS71Q03433 YFL015W-AYFL015W-A 318 nt8.85□□□□□ -0.99
VPS71Q03433 PTH1YHR189W 573 nt8.83□□□□□ -1
VPS71Q03433 RRD1YIL153W 1182 nt8.83□□□□□ -1
VPS71Q03433 YKL030WYKL030W 606 nt8.79□□□□□ -1
VPS71Q03433 YCL042WYCL042W 360 nt8.79□□□□□ -1
VPS71Q03433 SWE1YJL187C 2460 nt8.78□□□□□ -1
VPS71Q03433 YLR235CYLR235C 399 nt8.77□□□□□ -1.01
VPS71Q03433 LCB1YMR296C 1677 nt8.76□□□□□ -1.01
VPS71Q03433 FMT1YBL013W 1206 nt8.76□□□□□ -1.01
VPS71Q03433 RDN37-1RDN37-1 5354 nt8.76□□□□□ -1.01
VPS71Q03433 RDN37-2RDN37-2 5354 nt8.76□□□□□ -1.01
VPS71Q03433 SOR2YDL246C 1074 nt8.74□□□□□ -1.01
VPS71Q03433 SOR1YJR159W 1074 nt8.74□□□□□ -1.01
VPS71Q03433 GLK1YCL040W 1503 nt8.73□□□□□ -1.01
VPS71Q03433 RPM1RPM1 483 nt8.72□□□□□ -1.01
VPS71Q03433 CWP1YKL096W 720 nt8.65□□□□□ -1.02
VPS71Q03433 FMP52YER004W 696 nt8.63□□□□□ -1.03
VPS71Q03433 PAU16YKL224C 372 nt8.62□□□□□ -1.03
VPS71Q03433 SBA1YKL117W 651 nt8.61□□□□□ -1.03
VPS71Q03433 ADH2YMR303C 1047 nt8.61□□□□□ -1.03
VPS71Q03433 NAR1YNL240C 1476 nt8.6□□□□□ -1.03
VPS71Q03433 YFR018CYFR018C 1092 nt8.6□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms