Protein–RNA interactions for Protein: P0CX43

RPL1A, 60S ribosomal protein L1-A, yeastyeast

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL1AP0CX43 YLR154C-GYLR154C-G 150 nt11.87□□□□□ -0.51
RPL1AP0CX43 CCT6YDR188W 1641 nt11.86□□□□□ -0.51
RPL1AP0CX43 SUF2tP(AGG)C 72 nt11.7□□□□□ -0.54
RPL1AP0CX43 SUF10tP(AGG)N 72 nt11.7□□□□□ -0.54
RPL1AP0CX43 ADO1YJR105W 1023 nt11.69□□□□□ -0.54
RPL1AP0CX43 LPX1YOR084W 1164 nt11.68□□□□□ -0.54
RPL1AP0CX43 ERV46YAL042W 1248 nt11.67□□□□□ -0.54
RPL1AP0CX43 ALF1YNL148C 765 nt11.66□□□□□ -0.54
RPL1AP0CX43 SPT5YML010W 3192 nt11.65□□□□□ -0.54
RPL1AP0CX43 YEL076C-AYEL076C-A 651 nt11.64□□□□□ -0.55
RPL1AP0CX43 YEL076CYEL076C 651 nt11.64□□□□□ -0.55
RPL1AP0CX43 YJL152WYJL152W 360 nt11.64□□□□□ -0.55
RPL1AP0CX43 YLR464WYLR464W 651 nt11.64□□□□□ -0.55
RPL1AP0CX43 SPP1YPL138C 1062 nt11.63□□□□□ -0.55
RPL1AP0CX43 UBX6YJL048C 1191 nt11.6□□□□□ -0.55
RPL1AP0CX43 IDH1YNL037C 1083 nt11.59□□□□□ -0.55
RPL1AP0CX43 RTG1YOL067C 534 nt11.59□□□□□ -0.55
RPL1AP0CX43 SIS1YNL007C 1059 nt11.54□□□□□ -0.56
RPL1AP0CX43 YPS1YLR120C 1710 nt11.53□□□□□ -0.56
RPL1AP0CX43 YDR095CYDR095C 411 nt11.53□□□□□ -0.56
RPL1AP0CX43 YDR433WYDR433W 441 nt11.53□□□□□ -0.56
RPL1AP0CX43 YKR040CYKR040C 504 nt11.52□□□□□ -0.57
RPL1AP0CX43 TIR4YOR009W 1464 nt11.44□□□□□ -0.58
RPL1AP0CX43 GBP2YCL011C 1284 nt11.44□□□□□ -0.58
RPL1AP0CX43 MXR2YCL033C 507 nt11.4□□□□□ -0.58
RPL1AP0CX43 YHR165W-AYHR165W-A 312 nt11.36□□□□□ -0.59
RPL1AP0CX43 HUA1YGR268C 597 nt11.35□□□□□ -0.59
RPL1AP0CX43 MEP2YNL142W 1500 nt11.32□□□□□ -0.6
RPL1AP0CX43 CAC2YML102W 1407 nt11.32□□□□□ -0.6
RPL1AP0CX43 YDR094WYDR094W 336 nt11.31□□□□□ -0.6
RPL1AP0CX43 RPP2AYOL039W 321 nt11.31□□□□□ -0.6
RPL1AP0CX43 ART5YGR068C 1761 nt11.27□□□□□ -0.61
RPL1AP0CX43 YMR057CYMR057C 372 nt11.26□□□□□ -0.61
RPL1AP0CX43 YCL048W-AYCL048W-A 240 nt11.26□□□□□ -0.61
RPL1AP0CX43 PET9YBL030C 957 nt11.25□□□□□ -0.61
RPL1AP0CX43 PTP1YDL230W 1008 nt11.24□□□□□ -0.61
RPL1AP0CX43 SSA4YER103W 1929 nt11.24□□□□□ -0.61
RPL1AP0CX43 TCD2YKL027W 1344 nt11.24□□□□□ -0.61
RPL1AP0CX43 YFL015W-AYFL015W-A 318 nt11.23□□□□□ -0.61
RPL1AP0CX43 FRD1YEL047C 1413 nt11.19□□□□□ -0.62
RPL1AP0CX43 GFD2YCL036W 1701 nt11.18□□□□□ -0.62
RPL1AP0CX43 DED1YOR204W 1815 nt11.16□□□□□ -0.62
RPL1AP0CX43 DCW1YKL046C 1350 nt11.15□□□□□ -0.63
RPL1AP0CX43 RRD1YIL153W 1182 nt11.11□□□□□ -0.63
RPL1AP0CX43 PTH1YHR189W 573 nt11.08□□□□□ -0.64
RPL1AP0CX43 YKL030WYKL030W 606 nt11.08□□□□□ -0.64
RPL1AP0CX43 YLR235CYLR235C 399 nt11.06□□□□□ -0.64
RPL1AP0CX43 FPS1YLL043W 2010 nt11.06□□□□□ -0.64
RPL1AP0CX43 YCL042WYCL042W 360 nt11.04□□□□□ -0.64
RPL1AP0CX43 SOR2YDL246C 1074 nt11.03□□□□□ -0.64
RPL1AP0CX43 SOR1YJR159W 1074 nt11.03□□□□□ -0.64
RPL1AP0CX43 FMT1YBL013W 1206 nt11.02□□□□□ -0.65
RPL1AP0CX43 EMI2YDR516C 1503 nt10.99□□□□□ -0.65
RPL1AP0CX43 LCB1YMR296C 1677 nt10.98□□□□□ -0.65
RPL1AP0CX43 RTS2YOR077W 699 nt10.96□□□□□ -0.65
RPL1AP0CX43 YDL221WYDL221W 552 nt10.91□□□□□ -0.66
RPL1AP0CX43 SBA1YKL117W 651 nt10.9□□□□□ -0.66
RPL1AP0CX43 YMR090WYMR090W 684 nt10.9□□□□□ -0.66
RPL1AP0CX43 PAU16YKL224C 372 nt10.89□□□□□ -0.67
RPL1AP0CX43 CUE1YMR264W 612 nt10.89□□□□□ -0.67
RPL1AP0CX43 IRC15YPL017C 1500 nt10.89□□□□□ -0.67
RPL1AP0CX43 FMP52YER004W 696 nt10.88□□□□□ -0.67
RPL1AP0CX43 YFR018CYFR018C 1092 nt10.88□□□□□ -0.67
RPL1AP0CX43 YBR220CYBR220C 1683 nt10.85□□□□□ -0.67
RPL1AP0CX43 tL(GAG)GtL(GAG)G 82 nt10.84□□□□□ -0.67
RPL1AP0CX43 CWP1YKL096W 720 nt10.84□□□□□ -0.67
RPL1AP0CX43 BDF1YLR399C 2061 nt10.84□□□□□ -0.67
RPL1AP0CX43 RRT5YFR032C 870 nt10.82□□□□□ -0.68
RPL1AP0CX43 ADH2YMR303C 1047 nt10.81□□□□□ -0.68
RPL1AP0CX43 TIM23YNR017W 669 nt10.81□□□□□ -0.68
RPL1AP0CX43 SDH1YKL148C 1923 nt10.8□□□□□ -0.68
RPL1AP0CX43 PRE6YOL038W 765 nt10.79□□□□□ -0.68
RPL1AP0CX43 GIS3YLR094C 1509 nt10.78□□□□□ -0.68
RPL1AP0CX43 DIC1YLR348C 897 nt10.76□□□□□ -0.69
RPL1AP0CX43 YIL100WYIL100W 354 nt10.73□□□□□ -0.69
RPL1AP0CX43 YLR179CYLR179C 606 nt10.72□□□□□ -0.69
RPL1AP0CX43 SCC4YER147C 1875 nt10.72□□□□□ -0.69
RPL1AP0CX43 YPR064WYPR064W 420 nt10.7□□□□□ -0.7
RPL1AP0CX43 TAT1YBR069C 1860 nt10.7□□□□□ -0.7
RPL1AP0CX43 PCM1YEL058W 1674 nt10.67□□□□□ -0.7
RPL1AP0CX43 SNF6YHL025W 999 nt10.67□□□□□ -0.7
RPL1AP0CX43 TAD3YLR316C 969 nt10.67□□□□□ -0.7
RPL1AP0CX43 WSC2YNL283C 1512 nt10.64□□□□□ -0.71
RPL1AP0CX43 RNQ1YCL028W 1218 nt10.64□□□□□ -0.71
RPL1AP0CX43 AHT1YHR093W 549 nt10.63□□□□□ -0.71
RPL1AP0CX43 YIH1YCR059C 777 nt10.61□□□□□ -0.71
RPL1AP0CX43 YFL066CYFL066C 1179 nt10.59□□□□□ -0.71
RPL1AP0CX43 PEX25YPL112C 1185 nt10.56□□□□□ -0.72
RPL1AP0CX43 NAT4YMR069W 858 nt10.53□□□□□ -0.72
RPL1AP0CX43 YSP3YOR003W 1437 nt10.5□□□□□ -0.73
RPL1AP0CX43 BDH1YAL060W 1149 nt10.49□□□□□ -0.73
RPL1AP0CX43 YLL053CYLL053C 459 nt10.47□□□□□ -0.73
RPL1AP0CX43 AQY1YPR192W 918 nt10.47□□□□□ -0.73
RPL1AP0CX43 SEC11YIR022W 504 nt10.46□□□□□ -0.73
RPL1AP0CX43 YSC84YHR016C 1407 nt10.46□□□□□ -0.74
RPL1AP0CX43 YNL115CYNL115C 1935 nt10.46□□□□□ -0.74
RPL1AP0CX43 GLK1YCL040W 1503 nt10.44□□□□□ -0.74
RPL1AP0CX43 FTR1YER145C 1215 nt10.44□□□□□ -0.74
RPL1AP0CX43 YHL050CYHL050C 2094 nt10.44□□□□□ -0.74
RPL1AP0CX43 YNL195CYNL195C 786 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms