Protein–RNA interactions for Protein: P0CX40

RPS8B, 40S ribosomal protein S8-B, yeastyeast

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS8BP0CX40 WHI5YOR083W 888 nt9.4□□□□□ -0.9
RPS8BP0CX40 EMI2YDR516C 1503 nt9.4□□□□□ -0.91
RPS8BP0CX40 YBR220CYBR220C 1683 nt9.39□□□□□ -0.91
RPS8BP0CX40 ADO1YJR105W 1023 nt9.38□□□□□ -0.91
RPS8BP0CX40 SRB2YHR041C 633 nt9.37□□□□□ -0.91
RPS8BP0CX40 YDR095CYDR095C 411 nt9.36□□□□□ -0.91
RPS8BP0CX40 NVJ2YPR091C 2313 nt9.32□□□□□ -0.92
RPS8BP0CX40 FMP45YDL222C 930 nt9.3□□□□□ -0.92
RPS8BP0CX40 YCH1YGR203W 447 nt9.3□□□□□ -0.92
RPS8BP0CX40 DSK2YMR276W 1122 nt9.29□□□□□ -0.92
RPS8BP0CX40 YBL100CYBL100C 315 nt9.29□□□□□ -0.92
RPS8BP0CX40 YDL221WYDL221W 552 nt9.28□□□□□ -0.92
RPS8BP0CX40 SDH1YKL148C 1923 nt9.27□□□□□ -0.93
RPS8BP0CX40 TRM9YML014W 840 nt9.23□□□□□ -0.93
RPS8BP0CX40 CAC2YML102W 1407 nt9.2□□□□□ -0.94
RPS8BP0CX40 RPP2AYOL039W 321 nt9.19□□□□□ -0.94
RPS8BP0CX40 PTP1YDL230W 1008 nt9.18□□□□□ -0.94
RPS8BP0CX40 PCH2YBR186W 1695 nt9.17□□□□□ -0.94
RPS8BP0CX40 FUN26YAL022C 1554 nt9.16□□□□□ -0.94
RPS8BP0CX40 SEC11YIR022W 504 nt9.16□□□□□ -0.94
RPS8BP0CX40 ALF1YNL148C 765 nt9.16□□□□□ -0.94
RPS8BP0CX40 SCC4YER147C 1875 nt9.14□□□□□ -0.95
RPS8BP0CX40 GUT2YIL155C 1950 nt9.13□□□□□ -0.95
RPS8BP0CX40 YEL076C-AYEL076C-A 651 nt9.12□□□□□ -0.95
RPS8BP0CX40 YEL076CYEL076C 651 nt9.12□□□□□ -0.95
RPS8BP0CX40 YLR464WYLR464W 651 nt9.12□□□□□ -0.95
RPS8BP0CX40 YLR154C-GYLR154C-G 150 nt9.11□□□□□ -0.95
RPS8BP0CX40 SUF2tP(AGG)C 72 nt9.09□□□□□ -0.95
RPS8BP0CX40 SUF10tP(AGG)N 72 nt9.09□□□□□ -0.95
RPS8BP0CX40 IRC15YPL017C 1500 nt9.07□□□□□ -0.96
RPS8BP0CX40 SIS1YNL007C 1059 nt9.05□□□□□ -0.96
RPS8BP0CX40 UBX6YJL048C 1191 nt9.03□□□□□ -0.96
RPS8BP0CX40 GIS3YLR094C 1509 nt9.02□□□□□ -0.97
RPS8BP0CX40 IDH1YNL037C 1083 nt9.01□□□□□ -0.97
RPS8BP0CX40 YLR236CYLR236C 324 nt9□□□□□ -0.97
RPS8BP0CX40 CCT6YDR188W 1641 nt9□□□□□ -0.97
RPS8BP0CX40 HUA1YGR268C 597 nt8.99□□□□□ -0.97
RPS8BP0CX40 YPR011CYPR011C 981 nt8.99□□□□□ -0.97
RPS8BP0CX40 YSC84YHR016C 1407 nt8.98□□□□□ -0.97
RPS8BP0CX40 ERV46YAL042W 1248 nt8.97□□□□□ -0.97
RPS8BP0CX40 YJL152WYJL152W 360 nt8.96□□□□□ -0.98
RPS8BP0CX40 PIB2YGL023C 1908 nt8.95□□□□□ -0.98
RPS8BP0CX40 GFD2YCL036W 1701 nt8.92□□□□□ -0.98
RPS8BP0CX40 YDR094WYDR094W 336 nt8.91□□□□□ -0.98
RPS8BP0CX40 YKR040CYKR040C 504 nt8.91□□□□□ -0.98
RPS8BP0CX40 ART5YGR068C 1761 nt8.91□□□□□ -0.98
RPS8BP0CX40 RTF1YGL244W 1677 nt8.91□□□□□ -0.98
RPS8BP0CX40 YHL050CYHL050C 2094 nt8.9□□□□□ -0.98
RPS8BP0CX40 YDR433WYDR433W 441 nt8.9□□□□□ -0.98
RPS8BP0CX40 RTG1YOL067C 534 nt8.89□□□□□ -0.99
RPS8BP0CX40 RTS2YOR077W 699 nt8.89□□□□□ -0.99
RPS8BP0CX40 LPX1YOR084W 1164 nt8.88□□□□□ -0.99
RPS8BP0CX40 PET9YBL030C 957 nt8.84□□□□□ -0.99
RPS8BP0CX40 FPS1YLL043W 2010 nt8.83□□□□□ -1
RPS8BP0CX40 BOP3YNL042W 1191 nt8.83□□□□□ -1
RPS8BP0CX40 RRT12YCR045C 1476 nt8.83□□□□□ -1
RPS8BP0CX40 CUE1YMR264W 612 nt8.82□□□□□ -1
RPS8BP0CX40 YNL195CYNL195C 786 nt8.8□□□□□ -1
RPS8BP0CX40 SPP1YPL138C 1062 nt8.79□□□□□ -1
RPS8BP0CX40 GBP2YCL011C 1284 nt8.79□□□□□ -1
RPS8BP0CX40 RDN37-1RDN37-1 5354 nt8.78□□□□□ -1
RPS8BP0CX40 RDN37-2RDN37-2 5354 nt8.78□□□□□ -1
RPS8BP0CX40 PTK1YKL198C 1989 nt8.76□□□□□ -1.01
RPS8BP0CX40 YJL225CYJL225C 5277 nt8.74□□□□□ -1.01
RPS8BP0CX40 YIL100WYIL100W 354 nt8.73□□□□□ -1.01
RPS8BP0CX40 YFL015W-AYFL015W-A 318 nt8.72□□□□□ -1.01
RPS8BP0CX40 TIR4YOR009W 1464 nt8.69□□□□□ -1.02
RPS8BP0CX40 TCD2YKL027W 1344 nt8.68□□□□□ -1.02
RPS8BP0CX40 YCL048W-AYCL048W-A 240 nt8.67□□□□□ -1.02
RPS8BP0CX40 YMR057CYMR057C 372 nt8.66□□□□□ -1.02
RPS8BP0CX40 BOR1YNL275W 1731 nt8.65□□□□□ -1.03
RPS8BP0CX40 UME6YDR207C 2511 nt8.64□□□□□ -1.03
RPS8BP0CX40 YLR235CYLR235C 399 nt8.64□□□□□ -1.03
RPS8BP0CX40 NCP1YHR042W 2076 nt8.62□□□□□ -1.03
RPS8BP0CX40 YKL030WYKL030W 606 nt8.61□□□□□ -1.03
RPS8BP0CX40 RRT5YFR032C 870 nt8.6□□□□□ -1.03
RPS8BP0CX40 YFL054CYFL054C 1941 nt8.59□□□□□ -1.03
RPS8BP0CX40 MXR2YCL033C 507 nt8.58□□□□□ -1.04
RPS8BP0CX40 YCL042WYCL042W 360 nt8.56□□□□□ -1.04
RPS8BP0CX40 SPT8YLR055C 1809 nt8.54□□□□□ -1.04
RPS8BP0CX40 YFR018CYFR018C 1092 nt8.46□□□□□ -1.06
RPS8BP0CX40 tL(GAG)GtL(GAG)G 82 nt8.45□□□□□ -1.06
RPS8BP0CX40 SBA1YKL117W 651 nt8.45□□□□□ -1.06
RPS8BP0CX40 LCB1YMR296C 1677 nt8.45□□□□□ -1.06
RPS8BP0CX40 FRD1YEL047C 1413 nt8.45□□□□□ -1.06
RPS8BP0CX40 PTH1YHR189W 573 nt8.44□□□□□ -1.06
RPS8BP0CX40 PAU16YKL224C 372 nt8.43□□□□□ -1.06
RPS8BP0CX40 MCH5YOR306C 1566 nt8.41□□□□□ -1.06
RPS8BP0CX40 SOR2YDL246C 1074 nt8.37□□□□□ -1.07
RPS8BP0CX40 SOR1YJR159W 1074 nt8.37□□□□□ -1.07
RPS8BP0CX40 SWE1YJL187C 2460 nt8.37□□□□□ -1.07
RPS8BP0CX40 NAT4YMR069W 858 nt8.36□□□□□ -1.07
RPS8BP0CX40 HSP60YLR259C 1719 nt8.35□□□□□ -1.07
RPS8BP0CX40 FMP52YER004W 696 nt8.34□□□□□ -1.07
RPS8BP0CX40 SNF6YHL025W 999 nt8.34□□□□□ -1.07
RPS8BP0CX40 YPR064WYPR064W 420 nt8.34□□□□□ -1.07
RPS8BP0CX40 TIM23YNR017W 669 nt8.32□□□□□ -1.08
RPS8BP0CX40 ALG12YNR030W 1656 nt8.31□□□□□ -1.08
RPS8BP0CX40 GLK1YCL040W 1503 nt8.29□□□□□ -1.08
RPS8BP0CX40 DIC1YLR348C 897 nt8.29□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms