Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSNK1G3Q9Y6M4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC008741.2-201ENST00000612792 3115 ntBASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSNK1G3Q9Y6M4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 KRT8P37-201ENST00000451609 1420 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 FER1L4-210ENST00000615531 5998 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AC079776.1-201ENST00000401540 1152 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AC098850.1-201ENST00000419919 790 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AC007274.1-201ENST00000439805 662 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 TTTY23B-201ENST00000442790 549 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AC007389.4-201ENST00000454674 793 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 HILS1-202ENST00000545329 423 ntBASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSNK1G3Q9Y6M4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSNK1G3Q9Y6M4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms