Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC009053.2-201ENST00000563701 2365 ntBASIC18.45■□□□□ 0.54
CTDP1Q9Y5B0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 HAUS4P1-201ENST00000406739 1145 ntBASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 RRP7BP-205ENST00000566851 833 ntBASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 AC132938.2-201ENST00000579188 680 ntBASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 AL591163.1-201ENST00000641757 987 ntBASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 AC092171.3-201ENST00000610122 2651 ntBASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CTDP1Q9Y5B0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 AC080080.1-201ENST00000625121 2420 ntBASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 RARRES2P5-201ENST00000564013 466 ntBASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CTDP1Q9Y5B0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 ATP5G2P4-201ENST00000442175 420 ntBASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 IGHV3-72-202ENST00000621503 303 ntBASIC18.42■□□□□ 0.54
CTDP1Q9Y5B0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms