Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NINLQ9Y2I6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 SOCS2P1-201ENST00000417727 557 ntBASIC21.65■■□□□ 1.06
NINLQ9Y2I6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 AC133539.2-201ENST00000604757 467 ntBASIC21.65■■□□□ 1.06
NINLQ9Y2I6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 AC018892.3-201ENST00000623986 2499 ntBASIC21.65■■□□□ 1.06
NINLQ9Y2I6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NINLQ9Y2I6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 MIR4313-201ENST00000580760 101 ntBASIC21.64■■□□□ 1.06
NINLQ9Y2I6 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.64■■□□□ 1.06
NINLQ9Y2I6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
NINLQ9Y2I6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 TNRC18P3-201ENST00000441896 2691 ntBASIC21.64■■□□□ 1.05
NINLQ9Y2I6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
NINLQ9Y2I6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 AC006449.5-201ENST00000610658 2098 ntBASIC21.63■■□□□ 1.05
NINLQ9Y2I6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 ENPP7P5-201ENST00000541031 1031 ntBASIC21.63■■□□□ 1.05
NINLQ9Y2I6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.63■■□□□ 1.05
NINLQ9Y2I6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.62■■□□□ 1.05
NINLQ9Y2I6 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms