Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AC022145.2-201ENST00000598203 171 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AL109620.1-201ENST00000618738 1197 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 AL513210.1-201ENST00000629608 234 ntBASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.97■□□□□ 0.15
VPS9D1Q9Y2B5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 RN7SKP199-201ENST00000410325 305 ntBASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 BX842568.4-201ENST00000421222 227 ntBASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 UPF3AP2-201ENST00000457924 1132 ntBASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 RARRES2P9-201ENST00000565168 469 ntBASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VPS9D1Q9Y2B5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS9D1Q9Y2B5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VPS9D1Q9Y2B5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VPS9D1Q9Y2B5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
VPS9D1Q9Y2B5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.96■□□□□ 0.14
VPS9D1Q9Y2B5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AL353705.2-201ENST00000428243 662 ntBASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 MIR4469-201ENST00000583919 79 ntBASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 AP3S2-216ENST00000617003 1561 ntBASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms