Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FAM90A7P-201ENST00000382628 1395 ntBASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 FAM90A23P-201ENST00000400136 1395 ntBASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RIMBP3Q9UFD9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 AC092638.2-201ENST00000441105 947 ntBASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 ABHD17AP9-201ENST00000561925 548 ntBASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 PHBP15-201ENST00000574228 665 ntBASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 AL157813.1-201ENST00000612996 587 ntBASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 AC009053.2-201ENST00000563701 2365 ntBASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RIMBP3Q9UFD9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 AC084262.1-201ENST00000567818 751 ntBASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 NAMA-206ENST00000605377 509 ntTSL 5 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC24.51■■□□□ 1.51
RIMBP3Q9UFD9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AC138466.3-201ENST00000619983 221 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A21P-201ENST00000510875 1396 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A15P-201ENST00000514465 1395 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A6P-201ENST00000515148 1394 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A16P-201ENST00000526662 1395 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A9P-201ENST00000527940 1395 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A5P-201ENST00000528738 1395 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A14P-201ENST00000530386 1395 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 FAM90A13P-201ENST00000534703 1395 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 AC026320.2-201ENST00000434379 478 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 CR383656.3-201ENST00000551315 183 ntBASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC24.5■■□□□ 1.51
RIMBP3Q9UFD9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 IGKV1OR-2-201ENST00000457995 350 ntBASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 AL451007.2-201ENST00000632004 563 ntBASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC24.49■■□□□ 1.51
RIMBP3Q9UFD9 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 DUT-207ENST00000559416 635 ntTSL 2 BASIC24.48■■□□□ 1.51
RIMBP3Q9UFD9 MIR3180-2-201ENST00000581748 88 ntBASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms