Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CHCHD2P3-201ENST00000603038 451 ntBASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 LINC01115-203ENST00000606068 577 ntBASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCF1Q9UBD9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC063926.2-201ENST00000623766 1308 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC074338.1-201ENST00000416825 156 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 COX5BP8-201ENST00000416911 349 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 TARDBPP1-201ENST00000442013 1203 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 MEIS3P1-201ENST00000495167 958 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 CR383656.12-201ENST00000549567 513 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 WASH4P-201ENST00000564273 1246 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AC007431.3-201ENST00000623221 587 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 REXO1L1P-202ENST00000608646 1974 ntBASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLCF1Q9UBD9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 AC084018.2-201ENST00000613093 2607 ntBASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.17□□□□□ -0.14
CLCF1Q9UBD9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms