Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 RARRES2P5-201ENST00000564013 466 ntBASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 RRP7BP-205ENST00000566851 833 ntBASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.11□□□□□ -0.15
KIAA1549Q9HCM3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 KRT17P7-201ENST00000451704 1104 ntBASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AC007389.4-201ENST00000454674 793 ntBASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AL121723.1-201ENST00000445194 1519 ntBASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KIAA1549Q9HCM3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 GK-202ENST00000378941 458 ntTSL 3 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AC112492.5-201ENST00000421897 457 ntBASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 AC011477.6-201ENST00000604980 1927 ntBASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KIAA1549Q9HCM3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms