Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MEG3_2.1-201ENST00000611456 105 ntBASIC14.53□□□□□ -0.08
CHD8Q9HCK8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CHD8Q9HCK8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 POM121L8P-201ENST00000417732 1281 ntBASIC14.52□□□□□ -0.08
CHD8Q9HCK8 POM121L9P-203ENST00000441984 1285 ntBASIC14.52□□□□□ -0.08
CHD8Q9HCK8 AC011247.3-201ENST00000603297 438 ntBASIC14.52□□□□□ -0.08
CHD8Q9HCK8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 AC005622.1-201ENST00000636801 1703 ntBASIC14.52□□□□□ -0.08
CHD8Q9HCK8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CHD8Q9HCK8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 FAM90A2P-201ENST00000511144 1395 ntBASIC14.52□□□□□ -0.09
CHD8Q9HCK8 FAM90A25P-201ENST00000528404 1395 ntBASIC14.52□□□□□ -0.09
CHD8Q9HCK8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 GHSR-202ENST00000427970 912 ntBASIC14.52□□□□□ -0.09
CHD8Q9HCK8 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 AC021723.1-201ENST00000486306 515 ntBASIC14.52□□□□□ -0.09
CHD8Q9HCK8 GAPDHP40-201ENST00000505218 1006 ntBASIC14.52□□□□□ -0.09
CHD8Q9HCK8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 AC090164.2-201ENST00000611487 516 ntBASIC14.52□□□□□ -0.09
CHD8Q9HCK8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CHD8Q9HCK8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AL691432.1-201ENST00000596308 1422 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 MRPL37P1-201ENST00000592451 1337 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 KLF2P2-201ENST00000416807 1039 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AL160314.3-201ENST00000556041 767 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AC244197.1-201ENST00000456494 951 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AP001002.3-201ENST00000623482 206 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AL157791.1-201ENST00000553667 1699 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 AC079328.2-201ENST00000561241 3354 ntBASIC14.51□□□□□ -0.09
CHD8Q9HCK8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms