Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 MIR4321-201ENST00000592276 80 ntBASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 AP003680.1-201ENST00000598970 3660 ntBASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CCDC68Q9H2F9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AC112504.1-201ENST00000623415 1841 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 SPDYE11-202ENST00000450699 704 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AC098859.1-201ENST00000502915 1238 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 POLD2P1-201ENST00000511220 997 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 SPDYE9P-201ENST00000570642 692 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AC024267.1-201ENST00000582320 895 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 SPDYE10P-202ENST00000612005 668 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 SPDYE8P-202ENST00000612377 668 ntBASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC68Q9H2F9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 MIR574-201ENST00000385209 96 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 YBX2P1-201ENST00000394192 760 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 MCCD1P2-201ENST00000423228 335 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AC027307.2-201ENST00000591252 911 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AC073389.1-201ENST00000595595 795 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 SPTSSB-204ENST00000617024 1292 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AC008267.7-201ENST00000624570 1194 ntBASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms